Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H3f3cP02301 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
H3f3cP02301 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
H3f3cP02301 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H3f3cP02301 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
H3f3cP02301 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.75□□□□□ -0.69
H3f3cP02301 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.75□□□□□ -0.69
H3f3cP02301 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.75□□□□□ -0.69
H3f3cP02301 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.75□□□□□ -0.69
H3f3cP02301 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.75□□□□□ -0.69
H3f3cP02301 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC10.75□□□□□ -0.69
H3f3cP02301 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.75□□□□□ -0.69
H3f3cP02301 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC10.75□□□□□ -0.69
H3f3cP02301 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.75□□□□□ -0.69
H3f3cP02301 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.75□□□□□ -0.69
H3f3cP02301 Gm8062-201ENSMUST00000139696 444 ntBASIC10.75□□□□□ -0.69
H3f3cP02301 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.75□□□□□ -0.69
H3f3cP02301 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
H3f3cP02301 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.75□□□□□ -0.69
H3f3cP02301 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.75□□□□□ -0.69
H3f3cP02301 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
H3f3cP02301 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
H3f3cP02301 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H3f3cP02301 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
H3f3cP02301 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H3f3cP02301 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H3f3cP02301 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
H3f3cP02301 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H3f3cP02301 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
H3f3cP02301 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.74□□□□□ -0.69
H3f3cP02301 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
H3f3cP02301 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H3f3cP02301 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
H3f3cP02301 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
H3f3cP02301 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.74□□□□□ -0.69
H3f3cP02301 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H3f3cP02301 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
H3f3cP02301 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
H3f3cP02301 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC10.74□□□□□ -0.69
H3f3cP02301 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H3f3cP02301 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H3f3cP02301 Gm15703-201ENSMUST00000120250 880 ntBASIC10.74□□□□□ -0.69
H3f3cP02301 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC10.74□□□□□ -0.69
H3f3cP02301 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
H3f3cP02301 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
H3f3cP02301 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.74□□□□□ -0.69
H3f3cP02301 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC10.74□□□□□ -0.69
H3f3cP02301 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
H3f3cP02301 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.74□□□□□ -0.69
H3f3cP02301 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.74□□□□□ -0.69
H3f3cP02301 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H3f3cP02301 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
H3f3cP02301 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
H3f3cP02301 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
H3f3cP02301 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
H3f3cP02301 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
H3f3cP02301 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
H3f3cP02301 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms