Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC9.13□□□□□ -0.95
TcraP01849 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
TcraP01849 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TcraP01849 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TcraP01849 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
TcraP01849 Gm4204-201ENSMUST00000110798 1231 ntBASIC9.13□□□□□ -0.95
TcraP01849 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC9.13□□□□□ -0.95
TcraP01849 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
TcraP01849 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC9.13□□□□□ -0.95
TcraP01849 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TcraP01849 Gm27618-201ENSMUST00000183671 60 ntBASIC9.13□□□□□ -0.95
TcraP01849 Gm37277-201ENSMUST00000194052 1111 ntBASIC9.13□□□□□ -0.95
TcraP01849 Gm10766-202ENSMUST00000194123 606 ntBASIC9.13□□□□□ -0.95
TcraP01849 Gm17330-201ENSMUST00000221047 165 ntBASIC9.13□□□□□ -0.95
TcraP01849 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TcraP01849 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TcraP01849 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
TcraP01849 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TcraP01849 AC124433.1-202ENSMUST00000224762 1535 ntBASIC9.13□□□□□ -0.95
TcraP01849 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
TcraP01849 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
TcraP01849 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
TcraP01849 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
TcraP01849 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
TcraP01849 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TcraP01849 Gm37368-201ENSMUST00000193173 3212 ntBASIC9.13□□□□□ -0.95
TcraP01849 AC154517.2-201ENSMUST00000220829 2458 ntBASIC9.13□□□□□ -0.95
TcraP01849 Gm15222-202ENSMUST00000228667 1726 ntBASIC9.13□□□□□ -0.95
TcraP01849 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TcraP01849 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
TcraP01849 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
TcraP01849 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC9.13□□□□□ -0.95
TcraP01849 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
TcraP01849 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TcraP01849 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TcraP01849 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
TcraP01849 Gm5859-201ENSMUST00000165401 2324 ntBASIC9.13□□□□□ -0.95
TcraP01849 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC9.13□□□□□ -0.95
TcraP01849 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC9.13□□□□□ -0.95
TcraP01849 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
TcraP01849 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC9.12□□□□□ -0.95
TcraP01849 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 AC107453.4-201ENSMUST00000227068 1817 ntBASIC9.12□□□□□ -0.95
TcraP01849 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC9.12□□□□□ -0.95
TcraP01849 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
TcraP01849 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
TcraP01849 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC9.12□□□□□ -0.95
TcraP01849 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC9.12□□□□□ -0.95
TcraP01849 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
TcraP01849 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
TcraP01849 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC9.12□□□□□ -0.95
TcraP01849 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 Gm19184-201ENSMUST00000196798 928 ntBASIC9.12□□□□□ -0.95
TcraP01849 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC9.12□□□□□ -0.95
TcraP01849 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
TcraP01849 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
TcraP01849 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 CT009713.5-203ENSMUST00000224218 2079 ntBASIC9.12□□□□□ -0.95
TcraP01849 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
TcraP01849 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
TcraP01849 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
TcraP01849 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
TcraP01849 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC9.12□□□□□ -0.95
TcraP01849 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
TcraP01849 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC9.12□□□□□ -0.95
TcraP01849 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC9.12□□□□□ -0.95
TcraP01849 Gm28719-201ENSMUST00000187779 1757 ntBASIC9.12□□□□□ -0.95
TcraP01849 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms