Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Gm12058-201ENSMUST00000118614 437 ntBASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.78□□□□□ -0.68
Igh-VJ558P01758 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Gm5370-201ENSMUST00000187187 574 ntBASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Igh-VJ558P01758 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Igh-VJ558P01758 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Igh-VJ558P01758 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Igh-VJ558P01758 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Igh-VJ558P01758 Pck2-205ENSMUST00000226352 2784 ntBASIC10.77□□□□□ -0.68
Igh-VJ558P01758 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Igh-VJ558P01758 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.77□□□□□ -0.68
Igh-VJ558P01758 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
Igh-VJ558P01758 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.77□□□□□ -0.68
Igh-VJ558P01758 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Igh-VJ558P01758 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.77□□□□□ -0.69
Igh-VJ558P01758 Gm13875-201ENSMUST00000120162 282 ntBASIC10.77□□□□□ -0.69
Igh-VJ558P01758 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.77□□□□□ -0.69
Igh-VJ558P01758 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.77□□□□□ -0.69
Igh-VJ558P01758 Gm38158-201ENSMUST00000194617 339 ntBASIC10.77□□□□□ -0.69
Igh-VJ558P01758 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.77□□□□□ -0.69
Igh-VJ558P01758 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.77□□□□□ -0.69
Igh-VJ558P01758 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Igh-VJ558P01758 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.76□□□□□ -0.69
Igh-VJ558P01758 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10.76□□□□□ -0.69
Igh-VJ558P01758 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms