Protein–RNA interactions for Protein: O88253

Gm10226, Mszf39 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10226O88253 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Gm10226O88253 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Gm10226O88253 Gm43721-201ENSMUST00000199677 2313 ntBASIC9.62□□□□□ -0.87
Gm10226O88253 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Gm10226O88253 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Gm10226O88253 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Gm10226O88253 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Gm10226O88253 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Gm10226O88253 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Gm10226O88253 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
Gm10226O88253 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Gm10226O88253 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Gm10226O88253 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Gm10226O88253 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Gm10226O88253 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC9.61□□□□□ -0.87
Gm10226O88253 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Gm10226O88253 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 Gm43908-201ENSMUST00000205074 1472 ntBASIC9.61□□□□□ -0.87
Gm10226O88253 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Gm10226O88253 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC9.61□□□□□ -0.87
Gm10226O88253 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC9.61□□□□□ -0.87
Gm10226O88253 Gm15236-201ENSMUST00000117309 379 ntBASIC9.61□□□□□ -0.87
Gm10226O88253 Gm14130-201ENSMUST00000118417 987 ntBASIC9.61□□□□□ -0.87
Gm10226O88253 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC9.61□□□□□ -0.87
Gm10226O88253 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC9.61□□□□□ -0.87
Gm10226O88253 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
Gm10226O88253 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 Gm26361-201ENSMUST00000158868 186 ntBASIC9.61□□□□□ -0.87
Gm10226O88253 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 Gm25700-201ENSMUST00000177693 110 ntBASIC9.61□□□□□ -0.87
Gm10226O88253 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC9.61□□□□□ -0.87
Gm10226O88253 Gm8856-201ENSMUST00000185254 1144 ntBASIC9.61□□□□□ -0.87
Gm10226O88253 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC9.61□□□□□ -0.87
Gm10226O88253 Gm9230-201ENSMUST00000188228 532 ntBASIC9.61□□□□□ -0.87
Gm10226O88253 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC9.61□□□□□ -0.87
Gm10226O88253 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC9.61□□□□□ -0.87
Gm10226O88253 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC9.61□□□□□ -0.87
Gm10226O88253 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC9.61□□□□□ -0.87
Gm10226O88253 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Gm10226O88253 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC9.61□□□□□ -0.87
Gm10226O88253 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Gm10226O88253 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC9.61□□□□□ -0.87
Gm10226O88253 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Gm10226O88253 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm10226O88253 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm10226O88253 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC9.6□□□□□ -0.87
Gm10226O88253 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC9.6□□□□□ -0.87
Gm10226O88253 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Gm10226O88253 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm10226O88253 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm10226O88253 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm10226O88253 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm10226O88253 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm10226O88253 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm10226O88253 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm10226O88253 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm10226O88253 Gm45495-201ENSMUST00000200940 1700 ntBASIC9.6□□□□□ -0.87
Gm10226O88253 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Gm10226O88253 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm10226O88253 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm10226O88253 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Gm10226O88253 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC9.6□□□□□ -0.87
Gm10226O88253 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Gm10226O88253 Gm13296-201ENSMUST00000117854 997 ntBASIC9.6□□□□□ -0.87
Gm10226O88253 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC9.6□□□□□ -0.87
Gm10226O88253 Gm4760-201ENSMUST00000119663 1030 ntBASIC9.6□□□□□ -0.87
Gm10226O88253 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Gm10226O88253 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Gm10226O88253 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC9.6□□□□□ -0.87
Gm10226O88253 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms