Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trdmt1O55055 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trdmt1O55055 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trdmt1O55055 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trdmt1O55055 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trdmt1O55055 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trdmt1O55055 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trdmt1O55055 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trdmt1O55055 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trdmt1O55055 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trdmt1O55055 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trdmt1O55055 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trdmt1O55055 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.73□□□□□ -0.21
Trdmt1O55055 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trdmt1O55055 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trdmt1O55055 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trdmt1O55055 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Trdmt1O55055 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trdmt1O55055 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trdmt1O55055 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trdmt1O55055 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trdmt1O55055 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trdmt1O55055 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trdmt1O55055 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC13.72□□□□□ -0.21
Trdmt1O55055 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC13.72□□□□□ -0.21
Trdmt1O55055 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trdmt1O55055 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trdmt1O55055 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trdmt1O55055 Gm3332-201ENSMUST00000189337 928 ntBASIC13.72□□□□□ -0.21
Trdmt1O55055 Gm43184-201ENSMUST00000197247 542 ntBASIC13.72□□□□□ -0.21
Trdmt1O55055 Gm42682-201ENSMUST00000198349 1265 ntBASIC13.72□□□□□ -0.21
Trdmt1O55055 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Trdmt1O55055 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trdmt1O55055 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC13.72□□□□□ -0.21
Trdmt1O55055 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trdmt1O55055 AC166992.1-201ENSMUST00000216356 565 ntBASIC13.72□□□□□ -0.21
Trdmt1O55055 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC13.72□□□□□ -0.21
Trdmt1O55055 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trdmt1O55055 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trdmt1O55055 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.72□□□□□ -0.21
Trdmt1O55055 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trdmt1O55055 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trdmt1O55055 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trdmt1O55055 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trdmt1O55055 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trdmt1O55055 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trdmt1O55055 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trdmt1O55055 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trdmt1O55055 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trdmt1O55055 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Trdmt1O55055 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trdmt1O55055 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Trdmt1O55055 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trdmt1O55055 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trdmt1O55055 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trdmt1O55055 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trdmt1O55055 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trdmt1O55055 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trdmt1O55055 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.21
Trdmt1O55055 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trdmt1O55055 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trdmt1O55055 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trdmt1O55055 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trdmt1O55055 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trdmt1O55055 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trdmt1O55055 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trdmt1O55055 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.71□□□□□ -0.21
Trdmt1O55055 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC13.71□□□□□ -0.21
Trdmt1O55055 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC13.71□□□□□ -0.21
Trdmt1O55055 Gm44545-201ENSMUST00000208262 746 ntBASIC13.71□□□□□ -0.21
Trdmt1O55055 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC13.71□□□□□ -0.21
Trdmt1O55055 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.71□□□□□ -0.21
Trdmt1O55055 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trdmt1O55055 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trdmt1O55055 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trdmt1O55055 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trdmt1O55055 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trdmt1O55055 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trdmt1O55055 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Trdmt1O55055 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trdmt1O55055 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trdmt1O55055 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trdmt1O55055 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.71□□□□□ -0.22
Trdmt1O55055 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trdmt1O55055 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trdmt1O55055 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trdmt1O55055 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trdmt1O55055 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trdmt1O55055 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trdmt1O55055 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trdmt1O55055 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trdmt1O55055 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trdmt1O55055 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.7□□□□□ -0.22
Trdmt1O55055 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trdmt1O55055 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trdmt1O55055 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trdmt1O55055 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trdmt1O55055 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trdmt1O55055 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trdmt1O55055 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms