Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Alx4O35137 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.15□□□□□ -0.62
Alx4O35137 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.15□□□□□ -0.62
Alx4O35137 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.15□□□□□ -0.62
Alx4O35137 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Alx4O35137 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Alx4O35137 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Alx4O35137 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Alx4O35137 Gm24526-201ENSMUST00000082921 158 ntBASIC11.15□□□□□ -0.62
Alx4O35137 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.15□□□□□ -0.62
Alx4O35137 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Alx4O35137 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Alx4O35137 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Alx4O35137 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Alx4O35137 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Alx4O35137 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Alx4O35137 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Alx4O35137 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Alx4O35137 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Alx4O35137 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Alx4O35137 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.15□□□□□ -0.63
Alx4O35137 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.63
Alx4O35137 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Alx4O35137 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.63
Alx4O35137 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Alx4O35137 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Alx4O35137 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Alx4O35137 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Alx4O35137 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Alx4O35137 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Alx4O35137 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Alx4O35137 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Alx4O35137 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Alx4O35137 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Alx4O35137 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Alx4O35137 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.14□□□□□ -0.63
Alx4O35137 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Alx4O35137 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Alx4O35137 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Alx4O35137 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.14□□□□□ -0.63
Alx4O35137 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Alx4O35137 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Alx4O35137 Rmrp-201ENSMUST00000157463 271 ntBASIC11.14□□□□□ -0.63
Alx4O35137 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Alx4O35137 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Alx4O35137 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Alx4O35137 Gm37497-201ENSMUST00000195830 798 ntBASIC11.14□□□□□ -0.63
Alx4O35137 Gm38671-201ENSMUST00000200573 130 ntBASIC11.14□□□□□ -0.63
Alx4O35137 Gm44855-201ENSMUST00000205725 362 ntBASIC11.14□□□□□ -0.63
Alx4O35137 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Alx4O35137 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.14□□□□□ -0.63
Alx4O35137 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.14□□□□□ -0.63
Alx4O35137 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Alx4O35137 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Alx4O35137 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Alx4O35137 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Alx4O35137 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Alx4O35137 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Alx4O35137 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Alx4O35137 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Alx4O35137 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Alx4O35137 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Alx4O35137 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Alx4O35137 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
Alx4O35137 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Alx4O35137 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Alx4O35137 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.14□□□□□ -0.63
Alx4O35137 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Alx4O35137 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Alx4O35137 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Alx4O35137 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Alx4O35137 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Alx4O35137 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Alx4O35137 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Alx4O35137 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Alx4O35137 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Alx4O35137 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Alx4O35137 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Alx4O35137 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Alx4O35137 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Alx4O35137 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Alx4O35137 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.13□□□□□ -0.63
Alx4O35137 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Alx4O35137 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Alx4O35137 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Alx4O35137 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Alx4O35137 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.13□□□□□ -0.63
Alx4O35137 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Alx4O35137 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Alx4O35137 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Alx4O35137 Proscos-202ENSMUST00000178990 666 ntBASIC11.13□□□□□ -0.63
Alx4O35137 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.13□□□□□ -0.63
Alx4O35137 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.13□□□□□ -0.63
Alx4O35137 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.13□□□□□ -0.63
Alx4O35137 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.13□□□□□ -0.63
Alx4O35137 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Alx4O35137 Gm4768-201ENSMUST00000206199 686 ntBASIC11.13□□□□□ -0.63
Alx4O35137 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Alx4O35137 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Alx4O35137 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms