Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Polr1aO35134 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC18.86■□□□□ 0.61
Polr1aO35134 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Polr1aO35134 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Polr1aO35134 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Polr1aO35134 Gm15610-201ENSMUST00000120584 195 ntBASIC18.86■□□□□ 0.61
Polr1aO35134 Gm28388-201ENSMUST00000186262 437 ntBASIC18.86■□□□□ 0.61
Polr1aO35134 Gm9136-201ENSMUST00000193368 454 ntBASIC18.86■□□□□ 0.61
Polr1aO35134 Gm9645-201ENSMUST00000197131 792 ntBASIC18.86■□□□□ 0.61
Polr1aO35134 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Polr1aO35134 AC154257.1-202ENSMUST00000224729 843 ntBASIC18.86■□□□□ 0.61
Polr1aO35134 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Polr1aO35134 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Polr1aO35134 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Polr1aO35134 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Polr1aO35134 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Polr1aO35134 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Polr1aO35134 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Polr1aO35134 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Polr1aO35134 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Polr1aO35134 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Polr1aO35134 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Polr1aO35134 Gm9192-201ENSMUST00000183221 985 ntBASIC18.85■□□□□ 0.61
Polr1aO35134 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC18.85■□□□□ 0.61
Polr1aO35134 AC241621.2-201ENSMUST00000223991 2151 ntBASIC18.85■□□□□ 0.61
Polr1aO35134 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Polr1aO35134 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Polr1aO35134 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Polr1aO35134 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Polr1aO35134 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Polr1aO35134 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Polr1aO35134 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Polr1aO35134 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Polr1aO35134 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Polr1aO35134 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Polr1aO35134 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Polr1aO35134 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Polr1aO35134 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Polr1aO35134 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Polr1aO35134 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Polr1aO35134 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Polr1aO35134 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Polr1aO35134 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Polr1aO35134 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC18.84■□□□□ 0.61
Polr1aO35134 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Polr1aO35134 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Polr1aO35134 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
Polr1aO35134 Gm37028-201ENSMUST00000194276 107 ntBASIC18.84■□□□□ 0.61
Polr1aO35134 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC18.84■□□□□ 0.61
Polr1aO35134 Gm19009-201ENSMUST00000223072 823 ntBASIC18.84■□□□□ 0.61
Polr1aO35134 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Polr1aO35134 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Polr1aO35134 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Polr1aO35134 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Polr1aO35134 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Polr1aO35134 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Polr1aO35134 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Polr1aO35134 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Polr1aO35134 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Polr1aO35134 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Polr1aO35134 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC18.84■□□□□ 0.61
Polr1aO35134 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Polr1aO35134 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Polr1aO35134 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Polr1aO35134 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Polr1aO35134 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Polr1aO35134 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC18.83■□□□□ 0.61
Polr1aO35134 AC123834.1-201ENSMUST00000225346 2043 ntBASIC18.83■□□□□ 0.61
Polr1aO35134 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Polr1aO35134 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Polr1aO35134 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC18.83■□□□□ 0.61
Polr1aO35134 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC18.83■□□□□ 0.61
Polr1aO35134 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Polr1aO35134 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC18.83■□□□□ 0.61
Polr1aO35134 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC18.83■□□□□ 0.61
Polr1aO35134 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Polr1aO35134 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC18.83■□□□□ 0.61
Polr1aO35134 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Polr1aO35134 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Polr1aO35134 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Polr1aO35134 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Polr1aO35134 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Polr1aO35134 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC18.83■□□□□ 0.6
Polr1aO35134 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Polr1aO35134 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Polr1aO35134 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC18.83■□□□□ 0.6
Polr1aO35134 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Polr1aO35134 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC18.83■□□□□ 0.6
Polr1aO35134 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Polr1aO35134 Gm13937-201ENSMUST00000121000 988 ntBASIC18.83■□□□□ 0.6
Polr1aO35134 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC18.83■□□□□ 0.6
Polr1aO35134 Gm6771-201ENSMUST00000182716 1001 ntBASIC18.83■□□□□ 0.6
Polr1aO35134 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Polr1aO35134 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Polr1aO35134 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Polr1aO35134 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Polr1aO35134 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Polr1aO35134 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Polr1aO35134 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Polr1aO35134 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms