Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.02□□□□□ -0.33
Ebf3O08791 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.02□□□□□ -0.33
Ebf3O08791 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf3O08791 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf3O08791 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Ebf3O08791 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf3O08791 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ebf3O08791 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ebf3O08791 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ebf3O08791 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ebf3O08791 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ebf3O08791 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf3O08791 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf3O08791 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf3O08791 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf3O08791 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf3O08791 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ebf3O08791 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf3O08791 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf3O08791 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf3O08791 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.01□□□□□ -0.33
Ebf3O08791 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf3O08791 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf3O08791 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.01□□□□□ -0.33
Ebf3O08791 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.01□□□□□ -0.33
Ebf3O08791 Gm4909-201ENSMUST00000118749 794 ntBASIC13.01□□□□□ -0.33
Ebf3O08791 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.01□□□□□ -0.33
Ebf3O08791 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.01□□□□□ -0.33
Ebf3O08791 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC13.01□□□□□ -0.33
Ebf3O08791 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Ebf3O08791 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf3O08791 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.01□□□□□ -0.33
Ebf3O08791 Gm8885-201ENSMUST00000189382 598 ntBASIC13.01□□□□□ -0.33
Ebf3O08791 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.01□□□□□ -0.33
Ebf3O08791 Gm44262-201ENSMUST00000204969 372 ntBASIC13.01□□□□□ -0.33
Ebf3O08791 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.01□□□□□ -0.33
Ebf3O08791 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.01□□□□□ -0.33
Ebf3O08791 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf3O08791 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf3O08791 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf3O08791 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf3O08791 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf3O08791 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ebf3O08791 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf3O08791 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf3O08791 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf3O08791 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf3O08791 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf3O08791 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf3O08791 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf3O08791 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf3O08791 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf3O08791 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ebf3O08791 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Ebf3O08791 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ebf3O08791 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf3O08791 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ebf3O08791 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ebf3O08791 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf3O08791 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf3O08791 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf3O08791 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ebf3O08791 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf3O08791 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf3O08791 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ebf3O08791 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ebf3O08791 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ebf3O08791 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf3O08791 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ebf3O08791 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf3O08791 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Ebf3O08791 Gm12217-201ENSMUST00000118858 696 ntBASIC13□□□□□ -0.33
Ebf3O08791 Gm14208-201ENSMUST00000119645 678 ntBASIC13□□□□□ -0.33
Ebf3O08791 Gm12176-201ENSMUST00000121420 875 ntBASIC13□□□□□ -0.33
Ebf3O08791 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13□□□□□ -0.33
Ebf3O08791 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf3O08791 Gm22902-201ENSMUST00000158488 302 ntBASIC13□□□□□ -0.33
Ebf3O08791 Gm25700-201ENSMUST00000177693 110 ntBASIC13□□□□□ -0.33
Ebf3O08791 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ebf3O08791 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13□□□□□ -0.33
Ebf3O08791 Mir6927-201ENSMUST00000184494 71 ntBASIC13□□□□□ -0.33
Ebf3O08791 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC13□□□□□ -0.33
Ebf3O08791 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13□□□□□ -0.33
Ebf3O08791 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf3O08791 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf3O08791 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf3O08791 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf3O08791 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf3O08791 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf3O08791 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf3O08791 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf3O08791 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf3O08791 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ebf3O08791 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf3O08791 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ebf3O08791 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf3O08791 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf3O08791 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ebf3O08791 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ebf3O08791 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms