Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Raet1bO08603 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Raet1bO08603 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Raet1bO08603 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Raet1bO08603 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Raet1bO08603 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Raet1bO08603 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Raet1bO08603 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Raet1bO08603 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.09□□□□□ -0.63
Raet1bO08603 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Raet1bO08603 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Raet1bO08603 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Raet1bO08603 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.09□□□□□ -0.63
Raet1bO08603 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Raet1bO08603 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Raet1bO08603 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Raet1bO08603 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Raet1bO08603 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Raet1bO08603 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Raet1bO08603 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Raet1bO08603 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.08□□□□□ -0.64
Raet1bO08603 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raet1bO08603 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raet1bO08603 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Raet1bO08603 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Raet1bO08603 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raet1bO08603 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raet1bO08603 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Raet1bO08603 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raet1bO08603 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raet1bO08603 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raet1bO08603 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raet1bO08603 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raet1bO08603 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Raet1bO08603 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.08□□□□□ -0.64
Raet1bO08603 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
Raet1bO08603 Gm11597-201ENSMUST00000121423 964 ntBASIC11.08□□□□□ -0.64
Raet1bO08603 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.08□□□□□ -0.64
Raet1bO08603 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raet1bO08603 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Raet1bO08603 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.08□□□□□ -0.64
Raet1bO08603 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.08□□□□□ -0.64
Raet1bO08603 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raet1bO08603 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Raet1bO08603 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Raet1bO08603 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raet1bO08603 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raet1bO08603 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raet1bO08603 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raet1bO08603 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raet1bO08603 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raet1bO08603 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raet1bO08603 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Raet1bO08603 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Raet1bO08603 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Raet1bO08603 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raet1bO08603 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raet1bO08603 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Raet1bO08603 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Raet1bO08603 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Raet1bO08603 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.07□□□□□ -0.64
Raet1bO08603 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raet1bO08603 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raet1bO08603 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raet1bO08603 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Raet1bO08603 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Raet1bO08603 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raet1bO08603 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raet1bO08603 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raet1bO08603 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.07□□□□□ -0.64
Raet1bO08603 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Raet1bO08603 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raet1bO08603 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.07□□□□□ -0.64
Raet1bO08603 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raet1bO08603 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raet1bO08603 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raet1bO08603 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Raet1bO08603 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Raet1bO08603 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Raet1bO08603 Gm13315-201ENSMUST00000120376 991 ntBASIC11.07□□□□□ -0.64
Raet1bO08603 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Raet1bO08603 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.07□□□□□ -0.64
Raet1bO08603 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.07□□□□□ -0.64
Raet1bO08603 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.07□□□□□ -0.64
Raet1bO08603 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.07□□□□□ -0.64
Raet1bO08603 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.07□□□□□ -0.64
Raet1bO08603 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Raet1bO08603 Gm44405-201ENSMUST00000198952 126 ntBASIC11.07□□□□□ -0.64
Raet1bO08603 Gm45925-201ENSMUST00000218882 744 ntBASIC11.07□□□□□ -0.64
Raet1bO08603 Gm45930-201ENSMUST00000221330 292 ntBASIC11.07□□□□□ -0.64
Raet1bO08603 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.07□□□□□ -0.64
Raet1bO08603 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Raet1bO08603 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raet1bO08603 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Raet1bO08603 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Raet1bO08603 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raet1bO08603 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raet1bO08603 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raet1bO08603 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Raet1bO08603 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms