Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.95□□□□□ -0.02
Ube4aE9Q735 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ube4aE9Q735 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ube4aE9Q735 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ube4aE9Q735 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ube4aE9Q735 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Ube4aE9Q735 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ube4aE9Q735 Gm23596-201ENSMUST00000104304 132 ntBASIC14.95□□□□□ -0.02
Ube4aE9Q735 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Ube4aE9Q735 Gm13045-201ENSMUST00000119019 712 ntBASIC14.95□□□□□ -0.02
Ube4aE9Q735 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ube4aE9Q735 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Ube4aE9Q735 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ube4aE9Q735 Gm9211-201ENSMUST00000182882 975 ntBASIC14.95□□□□□ -0.02
Ube4aE9Q735 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Ube4aE9Q735 Gm18393-201ENSMUST00000208349 1131 ntBASIC14.95□□□□□ -0.02
Ube4aE9Q735 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ube4aE9Q735 AC133602.1-201ENSMUST00000227510 509 ntBASIC14.95□□□□□ -0.02
Ube4aE9Q735 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ube4aE9Q735 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ube4aE9Q735 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ube4aE9Q735 Gm6580-201ENSMUST00000117504 1357 ntBASIC14.95□□□□□ -0.02
Ube4aE9Q735 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ube4aE9Q735 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Ube4aE9Q735 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ube4aE9Q735 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ube4aE9Q735 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ube4aE9Q735 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4aE9Q735 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4aE9Q735 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4aE9Q735 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4aE9Q735 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4aE9Q735 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4aE9Q735 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.94□□□□□ -0.02
Ube4aE9Q735 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4aE9Q735 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Ube4aE9Q735 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Ube4aE9Q735 Gm14058-201ENSMUST00000116082 735 ntBASIC14.94□□□□□ -0.02
Ube4aE9Q735 Gm11941-201ENSMUST00000119904 610 ntBASIC14.94□□□□□ -0.02
Ube4aE9Q735 Gm25881-201ENSMUST00000157783 103 ntBASIC14.94□□□□□ -0.02
Ube4aE9Q735 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC14.94□□□□□ -0.02
Ube4aE9Q735 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4aE9Q735 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC14.94□□□□□ -0.02
Ube4aE9Q735 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC14.94□□□□□ -0.02
Ube4aE9Q735 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Ube4aE9Q735 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.94□□□□□ -0.02
Ube4aE9Q735 Gm45118-201ENSMUST00000208928 825 ntBASIC14.94□□□□□ -0.02
Ube4aE9Q735 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC14.94□□□□□ -0.02
Ube4aE9Q735 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4aE9Q735 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4aE9Q735 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4aE9Q735 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4aE9Q735 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.94□□□□□ -0.02
Ube4aE9Q735 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.94□□□□□ -0.02
Ube4aE9Q735 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ube4aE9Q735 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.94□□□□□ -0.02
Ube4aE9Q735 Gm18782-201ENSMUST00000209023 1399 ntBASIC14.94□□□□□ -0.02
Ube4aE9Q735 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.94□□□□□ -0.02
Ube4aE9Q735 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4aE9Q735 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4aE9Q735 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ube4aE9Q735 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4aE9Q735 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4aE9Q735 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4aE9Q735 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4aE9Q735 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4aE9Q735 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4aE9Q735 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ube4aE9Q735 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4aE9Q735 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4aE9Q735 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4aE9Q735 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.93□□□□□ -0.02
Ube4aE9Q735 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4aE9Q735 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4aE9Q735 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4aE9Q735 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4aE9Q735 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4aE9Q735 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4aE9Q735 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4aE9Q735 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4aE9Q735 Gm11511-201ENSMUST00000118146 540 ntBASIC14.93□□□□□ -0.02
Ube4aE9Q735 Gm6506-201ENSMUST00000119775 1136 ntBASIC14.93□□□□□ -0.02
Ube4aE9Q735 Gm7722-201ENSMUST00000120646 741 ntBASIC14.93□□□□□ -0.02
Ube4aE9Q735 Gm12196-201ENSMUST00000120954 262 ntBASIC14.93□□□□□ -0.02
Ube4aE9Q735 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4aE9Q735 Mir1943-201ENSMUST00000158276 73 ntBASIC14.93□□□□□ -0.02
Ube4aE9Q735 Gm43184-201ENSMUST00000197247 542 ntBASIC14.93□□□□□ -0.02
Ube4aE9Q735 Gm4607-201ENSMUST00000206649 577 ntBASIC14.93□□□□□ -0.02
Ube4aE9Q735 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4aE9Q735 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ube4aE9Q735 Gm26448-201ENSMUST00000082446 203 ntBASIC14.93□□□□□ -0.02
Ube4aE9Q735 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4aE9Q735 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4aE9Q735 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4aE9Q735 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4aE9Q735 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4aE9Q735 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4aE9Q735 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.93□□□□□ -0.02
Ube4aE9Q735 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ube4aE9Q735 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms