Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm5537-201ENSMUST00000091117 1252 ntBASIC6.74□□□□□ -1.33
Herc1E9PZP8 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Gm8146-201ENSMUST00000192106 1847 ntBASIC6.74□□□□□ -1.33
Herc1E9PZP8 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Prss23os-202ENSMUST00000179361 1362 ntBASIC6.74□□□□□ -1.33
Herc1E9PZP8 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Gm9164-201ENSMUST00000118700 1014 ntBASIC6.74□□□□□ -1.33
Herc1E9PZP8 Gm13071-201ENSMUST00000122237 376 ntBASIC6.74□□□□□ -1.33
Herc1E9PZP8 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC6.74□□□□□ -1.33
Herc1E9PZP8 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC6.74□□□□□ -1.33
Herc1E9PZP8 AC107711.3-201ENSMUST00000228939 1035 ntBASIC6.74□□□□□ -1.33
Herc1E9PZP8 Gm6478-201ENSMUST00000099450 742 ntBASIC6.74□□□□□ -1.33
Herc1E9PZP8 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Gm5053-201ENSMUST00000208361 1678 ntBASIC6.74□□□□□ -1.33
Herc1E9PZP8 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Gm13426-201ENSMUST00000117887 795 ntBASIC6.74□□□□□ -1.33
Herc1E9PZP8 Gm5863-201ENSMUST00000121760 1008 ntBASIC6.74□□□□□ -1.33
Herc1E9PZP8 Gm8163-201ENSMUST00000122020 1060 ntBASIC6.74□□□□□ -1.33
Herc1E9PZP8 H2-Pb-201ENSMUST00000172731 531 ntBASIC6.74□□□□□ -1.33
Herc1E9PZP8 Gm26379-201ENSMUST00000178125 138 ntBASIC6.74□□□□□ -1.33
Herc1E9PZP8 Gm7516-201ENSMUST00000186198 706 ntBASIC6.74□□□□□ -1.33
Herc1E9PZP8 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Gm17825-201ENSMUST00000206836 794 ntBASIC6.74□□□□□ -1.33
Herc1E9PZP8 AC155293.1-201ENSMUST00000219793 1026 ntBASIC6.74□□□□□ -1.33
Herc1E9PZP8 AC137871.1-201ENSMUST00000228278 475 ntBASIC6.74□□□□□ -1.33
Herc1E9PZP8 Gm4953-201ENSMUST00000077309 483 ntBASIC6.74□□□□□ -1.33
Herc1E9PZP8 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Gm6560-201ENSMUST00000198588 1591 ntBASIC6.74□□□□□ -1.33
Herc1E9PZP8 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Herc1E9PZP8 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Herc1E9PZP8 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC6.74□□□□□ -1.33
Herc1E9PZP8 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC6.73□□□□□ -1.33
Herc1E9PZP8 CT009527.1-201ENSMUST00000224205 339 ntBASIC6.73□□□□□ -1.33
Herc1E9PZP8 Cxcr1-201ENSMUST00000053389 1125 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Herc1E9PZP8 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Herc1E9PZP8 Olfr403-201ENSMUST00000076675 942 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Herc1E9PZP8 Olfr43-201ENSMUST00000078936 1092 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Herc1E9PZP8 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
Herc1E9PZP8 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Herc1E9PZP8 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Herc1E9PZP8 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Herc1E9PZP8 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Herc1E9PZP8 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Herc1E9PZP8 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Herc1E9PZP8 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Herc1E9PZP8 Mir683-2-201ENSMUST00000102099 109 ntBASIC6.73□□□□□ -1.33
Herc1E9PZP8 Ppih-205ENSMUST00000106321 1288 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Herc1E9PZP8 Gm8111-201ENSMUST00000117659 987 ntBASIC6.73□□□□□ -1.33
Herc1E9PZP8 Gm17033-201ENSMUST00000146663 593 ntTSL 3 BASIC6.73□□□□□ -1.33
Herc1E9PZP8 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC6.73□□□□□ -1.33
Herc1E9PZP8 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Herc1E9PZP8 Mir683-1-201ENSMUST00000179371 109 ntBASIC6.73□□□□□ -1.33
Herc1E9PZP8 Gm45808-201ENSMUST00000210701 789 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Herc1E9PZP8 Mir339-201ENSMUST00000083659 96 ntBASIC6.73□□□□□ -1.33
Herc1E9PZP8 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Herc1E9PZP8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Herc1E9PZP8 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Herc1E9PZP8 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Herc1E9PZP8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Herc1E9PZP8 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Herc1E9PZP8 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Herc1E9PZP8 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Herc1E9PZP8 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Herc1E9PZP8 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Herc1E9PZP8 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Herc1E9PZP8 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Herc1E9PZP8 Gm13034-201ENSMUST00000121342 3177 ntBASIC6.73□□□□□ -1.33
Herc1E9PZP8 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Herc1E9PZP8 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Herc1E9PZP8 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms