Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scaf11E9PZM7 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scaf11E9PZM7 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Scaf11E9PZM7 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Scaf11E9PZM7 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scaf11E9PZM7 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC17.18■□□□□ 0.34
Scaf11E9PZM7 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scaf11E9PZM7 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scaf11E9PZM7 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scaf11E9PZM7 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scaf11E9PZM7 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scaf11E9PZM7 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scaf11E9PZM7 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scaf11E9PZM7 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Scaf11E9PZM7 CT030684.3-201ENSMUST00000227308 2445 ntBASIC17.17■□□□□ 0.34
Scaf11E9PZM7 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scaf11E9PZM7 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scaf11E9PZM7 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scaf11E9PZM7 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scaf11E9PZM7 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scaf11E9PZM7 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scaf11E9PZM7 Gm6903-201ENSMUST00000160509 1366 ntBASIC17.17■□□□□ 0.34
Scaf11E9PZM7 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC17.17■□□□□ 0.34
Scaf11E9PZM7 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scaf11E9PZM7 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scaf11E9PZM7 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scaf11E9PZM7 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC17.17■□□□□ 0.34
Scaf11E9PZM7 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC17.17■□□□□ 0.34
Scaf11E9PZM7 Gm8815-201ENSMUST00000173809 620 ntBASIC17.17■□□□□ 0.34
Scaf11E9PZM7 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scaf11E9PZM7 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC17.17■□□□□ 0.34
Scaf11E9PZM7 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scaf11E9PZM7 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Scaf11E9PZM7 Gm44851-201ENSMUST00000205735 2309 ntBASIC17.16■□□□□ 0.34
Scaf11E9PZM7 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scaf11E9PZM7 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scaf11E9PZM7 Gm45638-201ENSMUST00000211507 2878 ntBASIC17.16■□□□□ 0.34
Scaf11E9PZM7 Gm13910-201ENSMUST00000121752 1428 ntBASIC17.16■□□□□ 0.34
Scaf11E9PZM7 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC17.16■□□□□ 0.34
Scaf11E9PZM7 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scaf11E9PZM7 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scaf11E9PZM7 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scaf11E9PZM7 Gm24231-201ENSMUST00000104315 133 ntBASIC17.16■□□□□ 0.34
Scaf11E9PZM7 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scaf11E9PZM7 Gm24398-201ENSMUST00000157870 109 ntBASIC17.16■□□□□ 0.34
Scaf11E9PZM7 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC17.16■□□□□ 0.34
Scaf11E9PZM7 Gm43752-201ENSMUST00000198475 697 ntBASIC17.16■□□□□ 0.34
Scaf11E9PZM7 Gm3017-201ENSMUST00000203603 1126 ntBASIC17.16■□□□□ 0.34
Scaf11E9PZM7 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC17.16■□□□□ 0.34
Scaf11E9PZM7 CT009536.2-201ENSMUST00000225370 665 ntBASIC17.16■□□□□ 0.34
Scaf11E9PZM7 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Scaf11E9PZM7 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scaf11E9PZM7 Gm5805-201ENSMUST00000072779 456 ntBASIC17.16■□□□□ 0.34
Scaf11E9PZM7 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scaf11E9PZM7 Gm18198-201ENSMUST00000204986 1551 ntBASIC17.16■□□□□ 0.34
Scaf11E9PZM7 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scaf11E9PZM7 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scaf11E9PZM7 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Scaf11E9PZM7 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC17.16■□□□□ 0.34
Scaf11E9PZM7 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scaf11E9PZM7 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Scaf11E9PZM7 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scaf11E9PZM7 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scaf11E9PZM7 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scaf11E9PZM7 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scaf11E9PZM7 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scaf11E9PZM7 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scaf11E9PZM7 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scaf11E9PZM7 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC17.15■□□□□ 0.34
Scaf11E9PZM7 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Scaf11E9PZM7 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scaf11E9PZM7 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scaf11E9PZM7 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scaf11E9PZM7 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scaf11E9PZM7 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scaf11E9PZM7 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scaf11E9PZM7 Gm45410-201ENSMUST00000211331 1093 ntBASIC17.15■□□□□ 0.34
Scaf11E9PZM7 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC17.15■□□□□ 0.34
Scaf11E9PZM7 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scaf11E9PZM7 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scaf11E9PZM7 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scaf11E9PZM7 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scaf11E9PZM7 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Scaf11E9PZM7 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
Scaf11E9PZM7 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Gm14942-201ENSMUST00000119642 336 ntBASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Gm8723-201ENSMUST00000166076 820 ntBASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Gm8701-201ENSMUST00000169259 874 ntBASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC17.14■□□□□ 0.33
Scaf11E9PZM7 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms