Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.74■□□□□ 0.11
Scn7aB1AYL1 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn7aB1AYL1 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn7aB1AYL1 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Scn7aB1AYL1 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn7aB1AYL1 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn7aB1AYL1 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Scn7aB1AYL1 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC15.74■□□□□ 0.11
Scn7aB1AYL1 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn7aB1AYL1 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn7aB1AYL1 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Gm12036-201ENSMUST00000120008 530 ntBASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Gm14441-201ENSMUST00000121960 540 ntBASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Gm8459-201ENSMUST00000162504 760 ntBASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Gm28388-201ENSMUST00000186262 437 ntBASIC15.73■□□□□ 0.11
Scn7aB1AYL1 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Gm25517-201ENSMUST00000083865 134 ntBASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Gm11783-201ENSMUST00000119549 885 ntBASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Gm44421-201ENSMUST00000205064 1221 ntBASIC15.73■□□□□ 0.11
Scn7aB1AYL1 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC15.73■□□□□ 0.11
Scn7aB1AYL1 AC122350.1-201ENSMUST00000228135 533 ntBASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Scn7aB1AYL1 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC15.72■□□□□ 0.11
Scn7aB1AYL1 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn7aB1AYL1 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Scn7aB1AYL1 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn7aB1AYL1 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn7aB1AYL1 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn7aB1AYL1 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn7aB1AYL1 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn7aB1AYL1 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Scn7aB1AYL1 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn7aB1AYL1 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn7aB1AYL1 Gm5380-201ENSMUST00000119296 2136 ntBASIC15.72■□□□□ 0.11
Scn7aB1AYL1 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn7aB1AYL1 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn7aB1AYL1 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC15.72■□□□□ 0.11
Scn7aB1AYL1 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC15.72■□□□□ 0.11
Scn7aB1AYL1 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn7aB1AYL1 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn7aB1AYL1 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn7aB1AYL1 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Scn7aB1AYL1 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC15.72■□□□□ 0.11
Scn7aB1AYL1 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC15.72■□□□□ 0.11
Scn7aB1AYL1 Gm6450-201ENSMUST00000200896 574 ntBASIC15.72■□□□□ 0.11
Scn7aB1AYL1 Gm7504-201ENSMUST00000201449 424 ntBASIC15.72■□□□□ 0.11
Scn7aB1AYL1 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Scn7aB1AYL1 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn7aB1AYL1 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn7aB1AYL1 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.72■□□□□ 0.11
Scn7aB1AYL1 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Scn7aB1AYL1 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Scn7aB1AYL1 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn7aB1AYL1 Gm18983-201ENSMUST00000222884 2729 ntBASIC15.72■□□□□ 0.11
Scn7aB1AYL1 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn7aB1AYL1 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Scn7aB1AYL1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn7aB1AYL1 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn7aB1AYL1 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn7aB1AYL1 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.71■□□□□ 0.11
Scn7aB1AYL1 Gm9796-201ENSMUST00000062249 2250 ntBASIC15.71■□□□□ 0.11
Scn7aB1AYL1 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Scn7aB1AYL1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn7aB1AYL1 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC15.71■□□□□ 0.11
Scn7aB1AYL1 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scn7aB1AYL1 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms