Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb1A2AQ07 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb1A2AQ07 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.78□□□□□ -0.36
Tubb1A2AQ07 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tubb1A2AQ07 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tubb1A2AQ07 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.77□□□□□ -0.36
Tubb1A2AQ07 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tubb1A2AQ07 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
Tubb1A2AQ07 Map1b-203ENSMUST00000223725 2669 ntBASIC12.77□□□□□ -0.36
Tubb1A2AQ07 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tubb1A2AQ07 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tubb1A2AQ07 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tubb1A2AQ07 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tubb1A2AQ07 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tubb1A2AQ07 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Tubb1A2AQ07 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tubb1A2AQ07 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tubb1A2AQ07 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Tubb1A2AQ07 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Tubb1A2AQ07 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Tubb1A2AQ07 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tubb1A2AQ07 Gm13736-201ENSMUST00000119272 253 ntBASIC12.77□□□□□ -0.37
Tubb1A2AQ07 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
Tubb1A2AQ07 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.77□□□□□ -0.37
Tubb1A2AQ07 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.77□□□□□ -0.37
Tubb1A2AQ07 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.77□□□□□ -0.37
Tubb1A2AQ07 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.77□□□□□ -0.37
Tubb1A2AQ07 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tubb1A2AQ07 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubb1A2AQ07 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Tubb1A2AQ07 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Tubb1A2AQ07 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubb1A2AQ07 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubb1A2AQ07 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tubb1A2AQ07 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubb1A2AQ07 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubb1A2AQ07 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubb1A2AQ07 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.37
Tubb1A2AQ07 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubb1A2AQ07 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubb1A2AQ07 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.77□□□□□ -0.37
Tubb1A2AQ07 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubb1A2AQ07 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb1A2AQ07 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Gm4984-201ENSMUST00000115987 360 ntBASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Tubb1A2AQ07 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.76□□□□□ -0.37
Tubb1A2AQ07 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Gm27731-201ENSMUST00000185192 107 ntBASIC12.76□□□□□ -0.37
Tubb1A2AQ07 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb1A2AQ07 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb1A2AQ07 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.76□□□□□ -0.37
Tubb1A2AQ07 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tubb1A2AQ07 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms