Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Scn1aA2APX8 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Scn1aA2APX8 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Scn1aA2APX8 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scn1aA2APX8 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Scn1aA2APX8 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scn1aA2APX8 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scn1aA2APX8 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scn1aA2APX8 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scn1aA2APX8 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Scn1aA2APX8 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Scn1aA2APX8 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.02□□□□□ -0.33
Scn1aA2APX8 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Scn1aA2APX8 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn1aA2APX8 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Scn1aA2APX8 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn1aA2APX8 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.02□□□□□ -0.33
Scn1aA2APX8 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Scn1aA2APX8 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn1aA2APX8 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Scn1aA2APX8 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn1aA2APX8 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn1aA2APX8 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn1aA2APX8 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn1aA2APX8 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn1aA2APX8 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn1aA2APX8 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn1aA2APX8 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Scn1aA2APX8 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn1aA2APX8 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn1aA2APX8 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scn1aA2APX8 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Scn1aA2APX8 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Scn1aA2APX8 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1aA2APX8 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1aA2APX8 Gm5616-201ENSMUST00000165252 384 ntBASIC13.01□□□□□ -0.33
Scn1aA2APX8 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Scn1aA2APX8 Gm8741-201ENSMUST00000174736 384 ntBASIC13.01□□□□□ -0.33
Scn1aA2APX8 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.01□□□□□ -0.33
Scn1aA2APX8 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1aA2APX8 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Scn1aA2APX8 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1aA2APX8 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.01□□□□□ -0.33
Scn1aA2APX8 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.01□□□□□ -0.33
Scn1aA2APX8 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1aA2APX8 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1aA2APX8 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1aA2APX8 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1aA2APX8 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Scn1aA2APX8 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Scn1aA2APX8 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1aA2APX8 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1aA2APX8 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Scn1aA2APX8 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Scn1aA2APX8 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1aA2APX8 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.01□□□□□ -0.33
Scn1aA2APX8 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1aA2APX8 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1aA2APX8 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1aA2APX8 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Scn1aA2APX8 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1aA2APX8 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1aA2APX8 Gm18734-201ENSMUST00000172937 808 ntBASIC13.01□□□□□ -0.33
Scn1aA2APX8 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.01□□□□□ -0.33
Scn1aA2APX8 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Scn1aA2APX8 Gm19187-201ENSMUST00000206781 892 ntBASIC13.01□□□□□ -0.33
Scn1aA2APX8 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1aA2APX8 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1aA2APX8 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.01□□□□□ -0.33
Scn1aA2APX8 AC171277.1-201ENSMUST00000216902 1441 ntBASIC13.01□□□□□ -0.33
Scn1aA2APX8 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Scn1aA2APX8 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scn1aA2APX8 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Scn1aA2APX8 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Scn1aA2APX8 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scn1aA2APX8 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1aA2APX8 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1aA2APX8 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13□□□□□ -0.33
Scn1aA2APX8 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scn1aA2APX8 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scn1aA2APX8 Gm4607-201ENSMUST00000206649 577 ntBASIC13□□□□□ -0.33
Scn1aA2APX8 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13□□□□□ -0.33
Scn1aA2APX8 AC153954.1-201ENSMUST00000216959 255 ntBASIC13□□□□□ -0.33
Scn1aA2APX8 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1aA2APX8 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13□□□□□ -0.33
Scn1aA2APX8 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1aA2APX8 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1aA2APX8 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1aA2APX8 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scn1aA2APX8 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1aA2APX8 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1aA2APX8 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1aA2APX8 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1aA2APX8 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1aA2APX8 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1aA2APX8 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1aA2APX8 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Scn1aA2APX8 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13□□□□□ -0.33
Scn1aA2APX8 Gm10305-201ENSMUST00000195331 2475 ntBASIC13□□□□□ -0.33
Scn1aA2APX8 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms