Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Gm5616-201ENSMUST00000165252 384 ntBASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Gm8741-201ENSMUST00000174736 384 ntBASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Gm10109-202ENSMUST00000206890 1211 ntBASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3854A0A1B0GSS6 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Gm11450-201ENSMUST00000121144 333 ntBASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Gm3854A0A1B0GSS6 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3854A0A1B0GSS6 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.47□□□□□ -0.41
Gm3854A0A1B0GSS6 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3854A0A1B0GSS6 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.47□□□□□ -0.41
Gm3854A0A1B0GSS6 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3854A0A1B0GSS6 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3854A0A1B0GSS6 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.47□□□□□ -0.41
Gm3854A0A1B0GSS6 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3854A0A1B0GSS6 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3854A0A1B0GSS6 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm3854A0A1B0GSS6 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms