Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Gm13492-201ENSMUST00000119772 665 ntBASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 B9d1os-201ENSMUST00000137010 674 ntBASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Gm13570-201ENSMUST00000140763 309 ntBASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Gm27046-201ENSMUST00000182160 463 ntBASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cfap99A0A140LIX9 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Cfap99A0A140LIX9 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Cfap99A0A140LIX9 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Cfap99A0A140LIX9 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
Cfap99A0A140LIX9 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cfap99A0A140LIX9 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cfap99A0A140LIX9 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 Gm25214-201ENSMUST00000104573 129 ntBASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cfap99A0A140LIX9 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cfap99A0A140LIX9 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cfap99A0A140LIX9 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Cfap99A0A140LIX9 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Cfap99A0A140LIX9 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cfap99A0A140LIX9 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cfap99A0A140LIX9 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cfap99A0A140LIX9 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cfap99A0A140LIX9 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Cfap99A0A140LIX9 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cfap99A0A140LIX9 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cfap99A0A140LIX9 Gm14704-201ENSMUST00000120300 874 ntBASIC14.94□□□□□ -0.02
Cfap99A0A140LIX9 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cfap99A0A140LIX9 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cfap99A0A140LIX9 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.94□□□□□ -0.02
Cfap99A0A140LIX9 Gm3096-201ENSMUST00000185770 364 ntBASIC14.94□□□□□ -0.02
Cfap99A0A140LIX9 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cfap99A0A140LIX9 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cfap99A0A140LIX9 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC14.94□□□□□ -0.02
Cfap99A0A140LIX9 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cfap99A0A140LIX9 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cfap99A0A140LIX9 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cfap99A0A140LIX9 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cfap99A0A140LIX9 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cfap99A0A140LIX9 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cfap99A0A140LIX9 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cfap99A0A140LIX9 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cfap99A0A140LIX9 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cfap99A0A140LIX9 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cfap99A0A140LIX9 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.93□□□□□ -0.02
Cfap99A0A140LIX9 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cfap99A0A140LIX9 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cfap99A0A140LIX9 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cfap99A0A140LIX9 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cfap99A0A140LIX9 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms