Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm7224-201ENSMUST00000121359 2066 ntBASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm44260-201ENSMUST00000204946 2094 ntBASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm4204-201ENSMUST00000110798 1231 ntBASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Cd63-ps-201ENSMUST00000145417 875 ntBASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm17870-201ENSMUST00000219489 1174 ntBASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 AC154846.1-201ENSMUST00000226278 862 ntBASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm37333-201ENSMUST00000192904 2251 ntBASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3n-3A0A0G2JEM0 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms