Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm15824-201ENSMUST00000119516 955 ntBASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm26927-201ENSMUST00000182385 965 ntBASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 AC130829.1-201ENSMUST00000221548 494 ntBASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm26035-201ENSMUST00000083065 308 ntBASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Matn2-203ENSMUST00000226766 3252 ntBASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm26684-202ENSMUST00000228229 8257 ntBASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Tyms-ps-201ENSMUST00000219550 915 ntBASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 AC167013.1-201ENSMUST00000228592 202 ntBASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Gm8706-201ENSMUST00000197372 1491 ntBASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav9n-2A0A0G2JDP3 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC9.07□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms