Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Gm37931-201ENSMUST00000194686 2866 ntBASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Gm24543-201ENSMUST00000103867 82 ntBASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Gm15460-201ENSMUST00000118147 391 ntBASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Gm43125-201ENSMUST00000201724 730 ntBASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Gm15500-202ENSMUST00000071641 1019 ntBASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Gm10175-201ENSMUST00000086013 645 ntBASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Gm15222-202ENSMUST00000228667 1726 ntBASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 AC126257.2-201ENSMUST00000215507 2300 ntBASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Gm43931-201ENSMUST00000204817 2870 ntBASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav8-1A0A075B641 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Gm11779-201ENSMUST00000118541 368 ntBASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Gm5638-201ENSMUST00000118618 1258 ntBASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 H2af-ps-201ENSMUST00000119066 295 ntBASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Gm13365-201ENSMUST00000121188 973 ntBASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Gm24158-201ENSMUST00000175263 71 ntBASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Gm24420-201ENSMUST00000176676 59 ntBASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Gm4804-201ENSMUST00000182234 999 ntBASIC8.92□□□□□ -0.98
Trav8-1A0A075B641 Gm6283-201ENSMUST00000182369 1000 ntBASIC8.92□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms