Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb3S4R1G7 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb3S4R1G7 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
H2afb3S4R1G7 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Gm14928-201ENSMUST00000120198 477 ntBASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Gm16479-201ENSMUST00000121706 932 ntBASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Mir1894-201ENSMUST00000122802 81 ntBASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Gm37497-201ENSMUST00000195830 798 ntBASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Gm45384-201ENSMUST00000210451 277 ntBASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Gm9908-201ENSMUST00000211534 448 ntBASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
H2afb3S4R1G7 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.27□□□□□ -0.6
H2afb3S4R1G7 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
H2afb3S4R1G7 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
H2afb3S4R1G7 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
H2afb3S4R1G7 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
H2afb3S4R1G7 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
H2afb3S4R1G7 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
H2afb3S4R1G7 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
H2afb3S4R1G7 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.27□□□□□ -0.6
H2afb3S4R1G7 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
H2afb3S4R1G7 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
H2afb3S4R1G7 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb3S4R1G7 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb3S4R1G7 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
H2afb3S4R1G7 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb3S4R1G7 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb3S4R1G7 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb3S4R1G7 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb3S4R1G7 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb3S4R1G7 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.27□□□□□ -0.61
H2afb3S4R1G7 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb3S4R1G7 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb3S4R1G7 Gm37042-201ENSMUST00000193816 581 ntBASIC11.27□□□□□ -0.61
H2afb3S4R1G7 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.27□□□□□ -0.61
H2afb3S4R1G7 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.27□□□□□ -0.61
H2afb3S4R1G7 Gm6745-201ENSMUST00000199216 526 ntBASIC11.27□□□□□ -0.61
H2afb3S4R1G7 Gm44124-201ENSMUST00000204159 472 ntBASIC11.27□□□□□ -0.61
H2afb3S4R1G7 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb3S4R1G7 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb3S4R1G7 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb3S4R1G7 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
H2afb3S4R1G7 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
H2afb3S4R1G7 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb3S4R1G7 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
H2afb3S4R1G7 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb3S4R1G7 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms