Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Gm13786-201ENSMUST00000122371 333 ntBASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Gm17208-201ENSMUST00000168388 535 ntBASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Gm3890-201ENSMUST00000182416 207 ntBASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Gm38158-201ENSMUST00000194617 339 ntBASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mrpl40Q9Z2Q5 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Gm26083-201ENSMUST00000157904 193 ntBASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Gm6621-201ENSMUST00000193251 772 ntBASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Gm18056-201ENSMUST00000207670 568 ntBASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Gm18061-201ENSMUST00000208350 562 ntBASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Gm18063-201ENSMUST00000208529 568 ntBASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Gm18052-201ENSMUST00000208750 559 ntBASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Gm8227-201ENSMUST00000223306 571 ntBASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Mrpl40Q9Z2Q5 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mrpl40Q9Z2Q5 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Mrpl40Q9Z2Q5 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mrpl40Q9Z2Q5 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.56□□□□□ -0.4
Mrpl40Q9Z2Q5 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Mrpl40Q9Z2Q5 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Mrpl40Q9Z2Q5 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mrpl40Q9Z2Q5 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 208.9 ms