Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 Gm9083-201ENSMUST00000120423 819 ntBASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Rps4l-202ENSMUST00000204242 789 ntBASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Gm44262-201ENSMUST00000204969 372 ntBASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Gm45433-201ENSMUST00000209386 247 ntBASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Gm8913-201ENSMUST00000209491 641 ntBASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Gm19994-201ENSMUST00000217086 586 ntBASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Gm8385-201ENSMUST00000058999 643 ntBASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Smarcb1Q9Z0H3 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Gm7857-201ENSMUST00000117957 358 ntBASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Gm27341-201ENSMUST00000183570 106 ntBASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Smarcb1Q9Z0H3 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms