Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
ClcnkaQ9WUB7 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Gm44124-201ENSMUST00000204159 472 ntBASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
ClcnkaQ9WUB7 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ClcnkaQ9WUB7 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
ClcnkaQ9WUB7 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
ClcnkaQ9WUB7 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
ClcnkaQ9WUB7 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ClcnkaQ9WUB7 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
ClcnkaQ9WUB7 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ClcnkaQ9WUB7 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.54□□□□□ -0.56
ClcnkaQ9WUB7 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ClcnkaQ9WUB7 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ClcnkaQ9WUB7 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ClcnkaQ9WUB7 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
ClcnkaQ9WUB7 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ClcnkaQ9WUB7 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ClcnkaQ9WUB7 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
ClcnkaQ9WUB7 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
ClcnkaQ9WUB7 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms