Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Upk3aQ9JKX8 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.48
Upk3aQ9JKX8 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Upk3aQ9JKX8 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Upk3aQ9JKX8 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.02□□□□□ -0.48
Upk3aQ9JKX8 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Upk3aQ9JKX8 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Upk3aQ9JKX8 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 Gm43438-201ENSMUST00000198133 379 ntBASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3aQ9JKX8 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 Gm14726-201ENSMUST00000120623 896 ntBASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 Gm38266-201ENSMUST00000194931 421 ntBASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3aQ9JKX8 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12□□□□□ -0.49
Upk3aQ9JKX8 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Upk3aQ9JKX8 Gm5053-201ENSMUST00000208361 1678 ntBASIC12□□□□□ -0.49
Upk3aQ9JKX8 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Upk3aQ9JKX8 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12□□□□□ -0.49
Upk3aQ9JKX8 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12□□□□□ -0.49
Upk3aQ9JKX8 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Upk3aQ9JKX8 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Upk3aQ9JKX8 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Upk3aQ9JKX8 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Upk3aQ9JKX8 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12□□□□□ -0.49
Upk3aQ9JKX8 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Upk3aQ9JKX8 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12□□□□□ -0.49
Upk3aQ9JKX8 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Upk3aQ9JKX8 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12□□□□□ -0.49
Upk3aQ9JKX8 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Upk3aQ9JKX8 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Upk3aQ9JKX8 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
Upk3aQ9JKX8 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Upk3aQ9JKX8 Gm8712-201ENSMUST00000221090 701 ntBASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms