Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.27□□□□□ -0.45
Rrp8Q9DB85 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rrp8Q9DB85 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rrp8Q9DB85 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rrp8Q9DB85 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rrp8Q9DB85 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rrp8Q9DB85 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rrp8Q9DB85 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Rrp8Q9DB85 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rrp8Q9DB85 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rrp8Q9DB85 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rrp8Q9DB85 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rrp8Q9DB85 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.27□□□□□ -0.45
Rrp8Q9DB85 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rrp8Q9DB85 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rrp8Q9DB85 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.27□□□□□ -0.45
Rrp8Q9DB85 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rrp8Q9DB85 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rrp8Q9DB85 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rrp8Q9DB85 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rrp8Q9DB85 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Rrp8Q9DB85 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rrp8Q9DB85 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rrp8Q9DB85 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rrp8Q9DB85 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.27□□□□□ -0.45
Rrp8Q9DB85 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rrp8Q9DB85 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.27□□□□□ -0.45
Rrp8Q9DB85 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp8Q9DB85 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rrp8Q9DB85 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Rrp8Q9DB85 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rrp8Q9DB85 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rrp8Q9DB85 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rrp8Q9DB85 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rrp8Q9DB85 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Rrp8Q9DB85 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.25□□□□□ -0.45
Rrp8Q9DB85 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.25□□□□□ -0.45
Rrp8Q9DB85 Mir7032-201ENSMUST00000185154 79 ntBASIC12.25□□□□□ -0.45
Rrp8Q9DB85 Gm7467-201ENSMUST00000185173 652 ntBASIC12.25□□□□□ -0.45
Rrp8Q9DB85 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rrp8Q9DB85 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rrp8Q9DB85 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rrp8Q9DB85 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rrp8Q9DB85 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.25□□□□□ -0.45
Rrp8Q9DB85 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.25□□□□□ -0.45
Rrp8Q9DB85 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rrp8Q9DB85 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rrp8Q9DB85 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rrp8Q9DB85 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rrp8Q9DB85 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rrp8Q9DB85 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rrp8Q9DB85 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rrp8Q9DB85 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rrp8Q9DB85 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
Rrp8Q9DB85 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Rrp8Q9DB85 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms