Protein–RNA interactions for Protein: Q9D5U5

Pudp, Pseudouridine-5'-phosphatase, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PudpQ9D5U5 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PudpQ9D5U5 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.13□□□□□ -0.47
PudpQ9D5U5 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
PudpQ9D5U5 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.12□□□□□ -0.47
PudpQ9D5U5 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.12□□□□□ -0.47
PudpQ9D5U5 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
PudpQ9D5U5 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Gm5687-201ENSMUST00000118252 640 ntBASIC12.12□□□□□ -0.47
PudpQ9D5U5 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.12□□□□□ -0.47
PudpQ9D5U5 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.12□□□□□ -0.47
PudpQ9D5U5 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.12□□□□□ -0.47
PudpQ9D5U5 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PudpQ9D5U5 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.12□□□□□ -0.47
PudpQ9D5U5 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
PudpQ9D5U5 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.12□□□□□ -0.47
PudpQ9D5U5 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
PudpQ9D5U5 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PudpQ9D5U5 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.11□□□□□ -0.47
PudpQ9D5U5 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PudpQ9D5U5 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PudpQ9D5U5 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PudpQ9D5U5 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PudpQ9D5U5 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PudpQ9D5U5 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PudpQ9D5U5 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
PudpQ9D5U5 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
PudpQ9D5U5 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.11□□□□□ -0.47
PudpQ9D5U5 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PudpQ9D5U5 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
PudpQ9D5U5 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PudpQ9D5U5 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.11□□□□□ -0.47
PudpQ9D5U5 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PudpQ9D5U5 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.11□□□□□ -0.47
PudpQ9D5U5 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PudpQ9D5U5 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PudpQ9D5U5 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.11□□□□□ -0.47
PudpQ9D5U5 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PudpQ9D5U5 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
PudpQ9D5U5 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PudpQ9D5U5 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PudpQ9D5U5 Gm13829-201ENSMUST00000119600 138 ntBASIC12.11□□□□□ -0.47
PudpQ9D5U5 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PudpQ9D5U5 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PudpQ9D5U5 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PudpQ9D5U5 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PudpQ9D5U5 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.11□□□□□ -0.47
PudpQ9D5U5 Gm8652-201ENSMUST00000181363 964 ntBASIC12.11□□□□□ -0.47
PudpQ9D5U5 Gm27847-201ENSMUST00000183711 107 ntBASIC12.11□□□□□ -0.47
PudpQ9D5U5 Gm27375-201ENSMUST00000183799 107 ntBASIC12.11□□□□□ -0.47
PudpQ9D5U5 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.11□□□□□ -0.47
PudpQ9D5U5 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.11□□□□□ -0.47
PudpQ9D5U5 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.11□□□□□ -0.47
PudpQ9D5U5 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.11□□□□□ -0.47
PudpQ9D5U5 Gm6266-201ENSMUST00000203844 806 ntBASIC12.11□□□□□ -0.47
PudpQ9D5U5 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
PudpQ9D5U5 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.11□□□□□ -0.47
PudpQ9D5U5 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PudpQ9D5U5 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PudpQ9D5U5 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PudpQ9D5U5 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
PudpQ9D5U5 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PudpQ9D5U5 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PudpQ9D5U5 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PudpQ9D5U5 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PudpQ9D5U5 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
PudpQ9D5U5 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms