Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Gm11978-201ENSMUST00000122315 466 ntBASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Gm5279-201ENSMUST00000199575 745 ntBASIC12.57□□□□□ -0.4
Trim42Q9D2H5 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.57□□□□□ -0.4
Trim42Q9D2H5 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Gm27618-201ENSMUST00000183671 60 ntBASIC12.56□□□□□ -0.4
Trim42Q9D2H5 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Gm17837-201ENSMUST00000186435 985 ntBASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim42Q9D2H5 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim42Q9D2H5 Gm15376-201ENSMUST00000122258 783 ntBASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms