Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Snf8Q9CZ28 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Gm8213-201ENSMUST00000118191 441 ntBASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Gm12384-201ENSMUST00000119228 919 ntBASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Gm11637-201ENSMUST00000120601 592 ntBASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Snf8Q9CZ28 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Gm24231-201ENSMUST00000104315 133 ntBASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Snord83b-201ENSMUST00000104546 94 ntBASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Gm10156-201ENSMUST00000122364 462 ntBASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.86□□□□□ -0.35
Snf8Q9CZ28 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Snf8Q9CZ28 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snf8Q9CZ28 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Snf8Q9CZ28 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snf8Q9CZ28 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.85□□□□□ -0.35
Snf8Q9CZ28 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.85□□□□□ -0.35
Snf8Q9CZ28 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snf8Q9CZ28 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snf8Q9CZ28 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snf8Q9CZ28 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snf8Q9CZ28 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Snf8Q9CZ28 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Snf8Q9CZ28 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Snf8Q9CZ28 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 193.3 ms