Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.4□□□□□ -0.42
Ssu72Q9CY97 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Gm2231-201ENSMUST00000125661 612 ntBASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Gm4034-201ENSMUST00000187674 480 ntBASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Gm37935-201ENSMUST00000192012 982 ntBASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Gm37922-201ENSMUST00000195596 455 ntBASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Gm24526-201ENSMUST00000082921 158 ntBASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ssu72Q9CY97 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ssu72Q9CY97 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Ssu72Q9CY97 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Ssu72Q9CY97 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.4□□□□□ -0.43
Ssu72Q9CY97 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Gm13612-201ENSMUST00000119276 390 ntBASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Gm10156-201ENSMUST00000122364 462 ntBASIC12.39□□□□□ -0.43
Ssu72Q9CY97 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Mir6956-201ENSMUST00000183598 62 ntBASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Gm8463-201ENSMUST00000208573 613 ntBASIC12.39□□□□□ -0.43
Ssu72Q9CY97 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Gm8598-201ENSMUST00000221184 836 ntBASIC12.39□□□□□ -0.43
Ssu72Q9CY97 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssu72Q9CY97 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssu72Q9CY97 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ssu72Q9CY97 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Ssu72Q9CY97 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssu72Q9CY97 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ssu72Q9CY97 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.38□□□□□ -0.43
Ssu72Q9CY97 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssu72Q9CY97 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssu72Q9CY97 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssu72Q9CY97 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.38□□□□□ -0.43
Ssu72Q9CY97 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms