Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Gm14928-201ENSMUST00000120198 477 ntBASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Gm27701-201ENSMUST00000184498 110 ntBASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Gm8805-201ENSMUST00000117848 313 ntBASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Gm11618-201ENSMUST00000117946 267 ntBASIC13.63□□□□□ -0.23
Ssr1Q9CY50 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Gm8515-201ENSMUST00000194852 576 ntBASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.63□□□□□ -0.23
Ssr1Q9CY50 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Gm6211-201ENSMUST00000147973 4275 ntBASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ssr1Q9CY50 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Gm11918-201ENSMUST00000121660 179 ntBASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ssr1Q9CY50 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms