Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim11Q99PQ2 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim11Q99PQ2 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Trim11Q99PQ2 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim11Q99PQ2 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.25□□□□□ -0.13
Trim11Q99PQ2 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim11Q99PQ2 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Gm8793-201ENSMUST00000183069 1303 ntBASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.24□□□□□ -0.13
Trim11Q99PQ2 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Gm17150-201ENSMUST00000165577 381 ntBASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Gm8602-201ENSMUST00000184045 607 ntBASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trim11Q99PQ2 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Gm7224-201ENSMUST00000121359 2066 ntBASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trim11Q99PQ2 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Matn2-203ENSMUST00000226766 3252 ntBASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Gm12502-201ENSMUST00000120197 444 ntBASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Gm8018-201ENSMUST00000173536 789 ntBASIC14.22□□□□□ -0.13
Trim11Q99PQ2 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms