Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdh15Q99PJ1 AC154361.2-201ENSMUST00000224747 943 ntBASIC13.8□□□□□ -0.2
Pcdh15Q99PJ1 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC13.8□□□□□ -0.2
Pcdh15Q99PJ1 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh15Q99PJ1 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.8□□□□□ -0.2
Pcdh15Q99PJ1 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh15Q99PJ1 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh15Q99PJ1 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh15Q99PJ1 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh15Q99PJ1 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh15Q99PJ1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh15Q99PJ1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pcdh15Q99PJ1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Pcdh15Q99PJ1 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.79□□□□□ -0.2
Pcdh15Q99PJ1 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Pcdh15Q99PJ1 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh15Q99PJ1 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pcdh15Q99PJ1 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
Pcdh15Q99PJ1 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pcdh15Q99PJ1 Gm11783-201ENSMUST00000119549 885 ntBASIC13.79□□□□□ -0.2
Pcdh15Q99PJ1 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh15Q99PJ1 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC13.79□□□□□ -0.2
Pcdh15Q99PJ1 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.79□□□□□ -0.2
Pcdh15Q99PJ1 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC13.79□□□□□ -0.2
Pcdh15Q99PJ1 Gm8459-201ENSMUST00000162504 760 ntBASIC13.79□□□□□ -0.2
Pcdh15Q99PJ1 Gm9884-201ENSMUST00000194343 1222 ntBASIC13.79□□□□□ -0.2
Pcdh15Q99PJ1 Gm6450-201ENSMUST00000200896 574 ntBASIC13.79□□□□□ -0.2
Pcdh15Q99PJ1 Gm29763-201ENSMUST00000205306 616 ntBASIC13.79□□□□□ -0.2
Pcdh15Q99PJ1 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Pcdh15Q99PJ1 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.79□□□□□ -0.2
Pcdh15Q99PJ1 AC130477.1-201ENSMUST00000226982 420 ntBASIC13.79□□□□□ -0.2
Pcdh15Q99PJ1 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh15Q99PJ1 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pcdh15Q99PJ1 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh15Q99PJ1 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh15Q99PJ1 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh15Q99PJ1 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pcdh15Q99PJ1 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.79□□□□□ -0.2
Pcdh15Q99PJ1 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh15Q99PJ1 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh15Q99PJ1 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdh15Q99PJ1 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh15Q99PJ1 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pcdh15Q99PJ1 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC13.78□□□□□ -0.2
Pcdh15Q99PJ1 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh15Q99PJ1 Gm9034-201ENSMUST00000182071 1005 ntBASIC13.78□□□□□ -0.2
Pcdh15Q99PJ1 Gm43852-201ENSMUST00000202098 917 ntBASIC13.78□□□□□ -0.2
Pcdh15Q99PJ1 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh15Q99PJ1 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.78□□□□□ -0.2
Pcdh15Q99PJ1 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh15Q99PJ1 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh15Q99PJ1 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh15Q99PJ1 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh15Q99PJ1 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh15Q99PJ1 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh15Q99PJ1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh15Q99PJ1 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh15Q99PJ1 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdh15Q99PJ1 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Pcdh15Q99PJ1 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC13.78□□□□□ -0.2
Pcdh15Q99PJ1 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh15Q99PJ1 Gm34379-201ENSMUST00000195036 290 ntBASIC13.78□□□□□ -0.2
Pcdh15Q99PJ1 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdh15Q99PJ1 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC13.78□□□□□ -0.2
Pcdh15Q99PJ1 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh15Q99PJ1 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh15Q99PJ1 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Pcdh15Q99PJ1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh15Q99PJ1 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh15Q99PJ1 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdh15Q99PJ1 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdh15Q99PJ1 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdh15Q99PJ1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdh15Q99PJ1 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC13.77□□□□□ -0.2
Pcdh15Q99PJ1 Gm6322-201ENSMUST00000118789 1004 ntBASIC13.77□□□□□ -0.21
Pcdh15Q99PJ1 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
Pcdh15Q99PJ1 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC13.77□□□□□ -0.21
Pcdh15Q99PJ1 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Pcdh15Q99PJ1 Gm25998-201ENSMUST00000175397 53 ntBASIC13.77□□□□□ -0.21
Pcdh15Q99PJ1 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh15Q99PJ1 Gm9192-201ENSMUST00000183221 985 ntBASIC13.77□□□□□ -0.21
Pcdh15Q99PJ1 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC13.77□□□□□ -0.21
Pcdh15Q99PJ1 Gm4034-201ENSMUST00000187674 480 ntBASIC13.77□□□□□ -0.21
Pcdh15Q99PJ1 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC13.77□□□□□ -0.21
Pcdh15Q99PJ1 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh15Q99PJ1 Gm8436-201ENSMUST00000210152 1080 ntBASIC13.77□□□□□ -0.21
Pcdh15Q99PJ1 Gm5749-201ENSMUST00000210673 1090 ntBASIC13.77□□□□□ -0.21
Pcdh15Q99PJ1 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Pcdh15Q99PJ1 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh15Q99PJ1 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh15Q99PJ1 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh15Q99PJ1 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh15Q99PJ1 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh15Q99PJ1 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Pcdh15Q99PJ1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh15Q99PJ1 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh15Q99PJ1 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh15Q99PJ1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Pcdh15Q99PJ1 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdh15Q99PJ1 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms