Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rtn4Q99P72 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
Rtn4Q99P72 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rtn4Q99P72 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rtn4Q99P72 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Rtn4Q99P72 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
Rtn4Q99P72 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rtn4Q99P72 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rtn4Q99P72 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rtn4Q99P72 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rtn4Q99P72 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rtn4Q99P72 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn4Q99P72 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Gm23931-201ENSMUST00000103842 109 ntBASIC16.54■□□□□ 0.24
Rtn4Q99P72 Gm8213-201ENSMUST00000118191 441 ntBASIC16.54■□□□□ 0.24
Rtn4Q99P72 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Gm9916-201ENSMUST00000192943 1228 ntBASIC16.54■□□□□ 0.24
Rtn4Q99P72 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Gm44849-201ENSMUST00000207595 484 ntBASIC16.54■□□□□ 0.24
Rtn4Q99P72 AC159297.2-201ENSMUST00000219567 1075 ntBASIC16.54■□□□□ 0.24
Rtn4Q99P72 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn4Q99P72 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Gm8399-201ENSMUST00000082300 1117 ntBASIC16.54■□□□□ 0.24
Rtn4Q99P72 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Bcl2-202ENSMUST00000189999 2841 ntBASIC16.54■□□□□ 0.24
Rtn4Q99P72 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Il17rd-203ENSMUST00000225146 3366 ntBASIC16.54■□□□□ 0.24
Rtn4Q99P72 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rtn4Q99P72 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC16.53■□□□□ 0.24
Rtn4Q99P72 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rtn4Q99P72 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtn4Q99P72 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
Rtn4Q99P72 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtn4Q99P72 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC16.53■□□□□ 0.24
Rtn4Q99P72 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtn4Q99P72 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtn4Q99P72 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC16.53■□□□□ 0.24
Rtn4Q99P72 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtn4Q99P72 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Rtn4Q99P72 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rtn4Q99P72 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtn4Q99P72 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rtn4Q99P72 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rtn4Q99P72 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC16.53■□□□□ 0.24
Rtn4Q99P72 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Rtn4Q99P72 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtn4Q99P72 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
Rtn4Q99P72 Gm23617-201ENSMUST00000175410 95 ntBASIC16.53■□□□□ 0.24
Rtn4Q99P72 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rtn4Q99P72 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC16.53■□□□□ 0.24
Rtn4Q99P72 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC16.53■□□□□ 0.24
Rtn4Q99P72 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC16.53■□□□□ 0.24
Rtn4Q99P72 Gm42710-201ENSMUST00000200608 985 ntBASIC16.53■□□□□ 0.24
Rtn4Q99P72 Gm44412-201ENSMUST00000203018 294 ntBASIC16.53■□□□□ 0.24
Rtn4Q99P72 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Rtn4Q99P72 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtn4Q99P72 AC133517.2-201ENSMUST00000226820 690 ntBASIC16.53■□□□□ 0.24
Rtn4Q99P72 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtn4Q99P72 Gm24919-201ENSMUST00000083020 106 ntBASIC16.53■□□□□ 0.24
Rtn4Q99P72 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtn4Q99P72 Olfr1234-201ENSMUST00000099783 945 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Rtn4Q99P72 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rtn4Q99P72 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtn4Q99P72 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtn4Q99P72 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtn4Q99P72 Zwilch-211ENSMUST00000176794 1746 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rtn4Q99P72 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtn4Q99P72 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtn4Q99P72 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rtn4Q99P72 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rtn4Q99P72 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rtn4Q99P72 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rtn4Q99P72 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms