Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC11.77□□□□□ -0.53
Nkx6-1Q99MA9 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.77□□□□□ -0.53
Nkx6-1Q99MA9 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.77□□□□□ -0.53
Nkx6-1Q99MA9 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-1Q99MA9 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-1Q99MA9 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Nkx6-1Q99MA9 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-1Q99MA9 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.77□□□□□ -0.53
Nkx6-1Q99MA9 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Nkx6-1Q99MA9 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-1Q99MA9 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-1Q99MA9 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.77□□□□□ -0.53
Nkx6-1Q99MA9 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Nkx6-1Q99MA9 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Nkx6-1Q99MA9 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-1Q99MA9 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-1Q99MA9 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-1Q99MA9 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-1Q99MA9 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Nkx6-1Q99MA9 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-1Q99MA9 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Gm12501-201ENSMUST00000119163 529 ntBASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Gm36991-201ENSMUST00000191800 648 ntBASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Gm19287-201ENSMUST00000203190 358 ntBASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 AC132260.2-201ENSMUST00000224482 344 ntBASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Gm21811-201ENSMUST00000096485 930 ntBASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Gm37648-201ENSMUST00000192072 2563 ntBASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Nkx6-1Q99MA9 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Gm6407-201ENSMUST00000176468 549 ntBASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Nkx6-1Q99MA9 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms