Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Gm6745-201ENSMUST00000199216 526 ntBASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Gm4768-201ENSMUST00000206199 686 ntBASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Gm32025-201ENSMUST00000217960 307 ntBASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Gm17794-201ENSMUST00000220252 955 ntBASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Gm5356-201ENSMUST00000093326 615 ntBASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdk5rap3Q99LM2 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Cdk5rap3Q99LM2 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cdk5rap3Q99LM2 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap3Q99LM2 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap3Q99LM2 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cdk5rap3Q99LM2 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap3Q99LM2 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap3Q99LM2 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap3Q99LM2 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.96□□□□□ -0.33
Cdk5rap3Q99LM2 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap3Q99LM2 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap3Q99LM2 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Cdk5rap3Q99LM2 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap3Q99LM2 Gm24231-201ENSMUST00000104315 133 ntBASIC12.96□□□□□ -0.33
Cdk5rap3Q99LM2 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap3Q99LM2 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap3Q99LM2 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Cdk5rap3Q99LM2 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Cdk5rap3Q99LM2 Gm27331-201ENSMUST00000183705 60 ntBASIC12.96□□□□□ -0.33
Cdk5rap3Q99LM2 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap3Q99LM2 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.96□□□□□ -0.33
Cdk5rap3Q99LM2 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.96□□□□□ -0.33
Cdk5rap3Q99LM2 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.96□□□□□ -0.33
Cdk5rap3Q99LM2 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap3Q99LM2 Gm19163-201ENSMUST00000223313 780 ntBASIC12.96□□□□□ -0.33
Cdk5rap3Q99LM2 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap3Q99LM2 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap3Q99LM2 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap3Q99LM2 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Cdk5rap3Q99LM2 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap3Q99LM2 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap3Q99LM2 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdk5rap3Q99LM2 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdk5rap3Q99LM2 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdk5rap3Q99LM2 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdk5rap3Q99LM2 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Cdk5rap3Q99LM2 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdk5rap3Q99LM2 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.96□□□□□ -0.34
Cdk5rap3Q99LM2 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cdk5rap3Q99LM2 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.96□□□□□ -0.34
Cdk5rap3Q99LM2 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdk5rap3Q99LM2 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdk5rap3Q99LM2 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cdk5rap3Q99LM2 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cdk5rap3Q99LM2 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cdk5rap3Q99LM2 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms