Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Usp11Q99K46 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Usp11Q99K46 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp11Q99K46 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp11Q99K46 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp11Q99K46 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.2□□□□□ -0.3
Usp11Q99K46 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp11Q99K46 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp11Q99K46 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp11Q99K46 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Usp11Q99K46 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.2□□□□□ -0.3
Usp11Q99K46 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.2□□□□□ -0.3
Usp11Q99K46 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.2□□□□□ -0.3
Usp11Q99K46 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp11Q99K46 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.2□□□□□ -0.3
Usp11Q99K46 Gm7029-201ENSMUST00000173226 450 ntBASIC13.2□□□□□ -0.3
Usp11Q99K46 Mir7085-201ENSMUST00000184353 66 ntBASIC13.2□□□□□ -0.3
Usp11Q99K46 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.2□□□□□ -0.3
Usp11Q99K46 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp11Q99K46 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp11Q99K46 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp11Q99K46 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Usp11Q99K46 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp11Q99K46 Gm10268-201ENSMUST00000085340 555 ntBASIC13.2□□□□□ -0.3
Usp11Q99K46 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp11Q99K46 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.2□□□□□ -0.3
Usp11Q99K46 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp11Q99K46 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.2□□□□□ -0.3
Usp11Q99K46 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp11Q99K46 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp11Q99K46 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Usp11Q99K46 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp11Q99K46 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp11Q99K46 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp11Q99K46 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp11Q99K46 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp11Q99K46 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.2□□□□□ -0.3
Usp11Q99K46 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp11Q99K46 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Usp11Q99K46 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp11Q99K46 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Usp11Q99K46 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp11Q99K46 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp11Q99K46 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp11Q99K46 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Usp11Q99K46 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp11Q99K46 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp11Q99K46 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp11Q99K46 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.19□□□□□ -0.3
Usp11Q99K46 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp11Q99K46 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp11Q99K46 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.19□□□□□ -0.3
Usp11Q99K46 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.19□□□□□ -0.3
Usp11Q99K46 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.19□□□□□ -0.3
Usp11Q99K46 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp11Q99K46 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Usp11Q99K46 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.19□□□□□ -0.3
Usp11Q99K46 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.19□□□□□ -0.3
Usp11Q99K46 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.19□□□□□ -0.3
Usp11Q99K46 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Usp11Q99K46 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp11Q99K46 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Usp11Q99K46 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp11Q99K46 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.19□□□□□ -0.3
Usp11Q99K46 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp11Q99K46 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Usp11Q99K46 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Usp11Q99K46 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Usp11Q99K46 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.19□□□□□ -0.3
Usp11Q99K46 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Usp11Q99K46 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.19□□□□□ -0.3
Usp11Q99K46 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.19□□□□□ -0.3
Usp11Q99K46 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.19□□□□□ -0.3
Usp11Q99K46 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp11Q99K46 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Usp11Q99K46 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Usp11Q99K46 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Usp11Q99K46 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.18□□□□□ -0.3
Usp11Q99K46 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp11Q99K46 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp11Q99K46 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp11Q99K46 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp11Q99K46 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Usp11Q99K46 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp11Q99K46 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.18□□□□□ -0.3
Usp11Q99K46 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Usp11Q99K46 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp11Q99K46 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp11Q99K46 Mir686-201ENSMUST00000102174 109 ntBASIC13.18□□□□□ -0.3
Usp11Q99K46 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.18□□□□□ -0.3
Usp11Q99K46 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Usp11Q99K46 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.18□□□□□ -0.3
Usp11Q99K46 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.18□□□□□ -0.3
Usp11Q99K46 AY702102-202ENSMUST00000194651 1173 ntBASIC13.18□□□□□ -0.3
Usp11Q99K46 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.18□□□□□ -0.3
Usp11Q99K46 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp11Q99K46 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp11Q99K46 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp11Q99K46 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Usp11Q99K46 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms