Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Mir7654-201ENSMUST00000185082 70 ntBASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.14□□□□□ -0.63
Thumpd1Q99J36 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Gm24231-201ENSMUST00000104315 133 ntBASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Gm22121-201ENSMUST00000175148 54 ntBASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Gm28631-201ENSMUST00000190740 334 ntBASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.13□□□□□ -0.63
Thumpd1Q99J36 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Cog3-203ENSMUST00000227473 4197 ntBASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Thumpd1Q99J36 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Thumpd1Q99J36 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Thumpd1Q99J36 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Thumpd1Q99J36 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.12□□□□□ -0.63
Thumpd1Q99J36 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Thumpd1Q99J36 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Thumpd1Q99J36 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Thumpd1Q99J36 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Thumpd1Q99J36 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Thumpd1Q99J36 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Thumpd1Q99J36 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.12□□□□□ -0.63
Thumpd1Q99J36 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Thumpd1Q99J36 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.12□□□□□ -0.63
Thumpd1Q99J36 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Thumpd1Q99J36 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Thumpd1Q99J36 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Thumpd1Q99J36 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Thumpd1Q99J36 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms