Protein–RNA interactions for Protein: Q99J10

Ctu1, Cytoplasmic tRNA 2-thiolation protein 1, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctu1Q99J10 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctu1Q99J10 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctu1Q99J10 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctu1Q99J10 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ctu1Q99J10 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ctu1Q99J10 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctu1Q99J10 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctu1Q99J10 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.81□□□□□ -0.2
Ctu1Q99J10 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ctu1Q99J10 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctu1Q99J10 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctu1Q99J10 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctu1Q99J10 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctu1Q99J10 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctu1Q99J10 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ctu1Q99J10 Gm9072-201ENSMUST00000218390 1514 ntBASIC13.81□□□□□ -0.2
Ctu1Q99J10 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.81□□□□□ -0.2
Ctu1Q99J10 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.81□□□□□ -0.2
Ctu1Q99J10 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Ctu1Q99J10 Gm24891-201ENSMUST00000104391 136 ntBASIC13.81□□□□□ -0.2
Ctu1Q99J10 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Ctu1Q99J10 Gm15573-201ENSMUST00000119487 540 ntBASIC13.81□□□□□ -0.2
Ctu1Q99J10 Mup-ps26-201ENSMUST00000121751 202 ntBASIC13.81□□□□□ -0.2
Ctu1Q99J10 Gm14760-201ENSMUST00000121831 999 ntBASIC13.81□□□□□ -0.2
Ctu1Q99J10 Gm15881-201ENSMUST00000148792 942 ntBASIC13.81□□□□□ -0.2
Ctu1Q99J10 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC13.81□□□□□ -0.2
Ctu1Q99J10 Gm5778-201ENSMUST00000171003 1072 ntBASIC13.81□□□□□ -0.2
Ctu1Q99J10 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ctu1Q99J10 Gm10774-201ENSMUST00000188689 204 ntBASIC13.81□□□□□ -0.2
Ctu1Q99J10 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC13.81□□□□□ -0.2
Ctu1Q99J10 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC13.81□□□□□ -0.2
Ctu1Q99J10 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ctu1Q99J10 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.81□□□□□ -0.2
Ctu1Q99J10 Gm4157-201ENSMUST00000211647 679 ntBASIC13.81□□□□□ -0.2
Ctu1Q99J10 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ctu1Q99J10 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctu1Q99J10 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctu1Q99J10 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctu1Q99J10 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctu1Q99J10 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ctu1Q99J10 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctu1Q99J10 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ctu1Q99J10 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctu1Q99J10 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctu1Q99J10 Gm21998-201ENSMUST00000117552 1308 ntBASIC13.81□□□□□ -0.2
Ctu1Q99J10 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ctu1Q99J10 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Ctu1Q99J10 Gm9129-201ENSMUST00000218173 1689 ntBASIC13.81□□□□□ -0.2
Ctu1Q99J10 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ctu1Q99J10 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctu1Q99J10 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ctu1Q99J10 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ctu1Q99J10 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ctu1Q99J10 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.8□□□□□ -0.2
Ctu1Q99J10 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctu1Q99J10 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctu1Q99J10 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ctu1Q99J10 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Ctu1Q99J10 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.8□□□□□ -0.2
Ctu1Q99J10 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctu1Q99J10 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ctu1Q99J10 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctu1Q99J10 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctu1Q99J10 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctu1Q99J10 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctu1Q99J10 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ctu1Q99J10 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ctu1Q99J10 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctu1Q99J10 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC13.8□□□□□ -0.2
Ctu1Q99J10 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.8□□□□□ -0.2
Ctu1Q99J10 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC13.8□□□□□ -0.2
Ctu1Q99J10 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.8□□□□□ -0.2
Ctu1Q99J10 Gm8194-201ENSMUST00000159783 859 ntBASIC13.8□□□□□ -0.2
Ctu1Q99J10 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ctu1Q99J10 Gm8100-201ENSMUST00000182906 988 ntBASIC13.8□□□□□ -0.2
Ctu1Q99J10 Gm19287-201ENSMUST00000203190 358 ntBASIC13.8□□□□□ -0.2
Ctu1Q99J10 Gm6905-201ENSMUST00000205729 511 ntBASIC13.8□□□□□ -0.2
Ctu1Q99J10 Gm4607-201ENSMUST00000206649 577 ntBASIC13.8□□□□□ -0.2
Ctu1Q99J10 CT030637.1-201ENSMUST00000228016 669 ntBASIC13.8□□□□□ -0.2
Ctu1Q99J10 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ctu1Q99J10 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctu1Q99J10 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
Ctu1Q99J10 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctu1Q99J10 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ctu1Q99J10 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Ctu1Q99J10 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctu1Q99J10 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.8□□□□□ -0.2
Ctu1Q99J10 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ctu1Q99J10 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ctu1Q99J10 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctu1Q99J10 Gm14150-201ENSMUST00000122404 1354 ntBASIC13.8□□□□□ -0.2
Ctu1Q99J10 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ctu1Q99J10 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctu1Q99J10 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ctu1Q99J10 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctu1Q99J10 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Ctu1Q99J10 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctu1Q99J10 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctu1Q99J10 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctu1Q99J10 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms