Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb1Q91Y08 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhb1Q91Y08 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhb1Q91Y08 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb1Q91Y08 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhb1Q91Y08 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13□□□□□ -0.33
Pcdhb1Q91Y08 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb1Q91Y08 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb1Q91Y08 Gm12314-201ENSMUST00000118104 538 ntBASIC13□□□□□ -0.33
Pcdhb1Q91Y08 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb1Q91Y08 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb1Q91Y08 Gm37008-201ENSMUST00000195712 319 ntBASIC13□□□□□ -0.33
Pcdhb1Q91Y08 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhb1Q91Y08 AC098716.1-201ENSMUST00000213527 703 ntBASIC13□□□□□ -0.33
Pcdhb1Q91Y08 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb1Q91Y08 AC140451.2-201ENSMUST00000228030 664 ntBASIC13□□□□□ -0.33
Pcdhb1Q91Y08 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
Pcdhb1Q91Y08 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb1Q91Y08 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pcdhb1Q91Y08 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb1Q91Y08 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb1Q91Y08 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb1Q91Y08 Gm27177-202ENSMUST00000183514 2703 ntBASIC13□□□□□ -0.33
Pcdhb1Q91Y08 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb1Q91Y08 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb1Q91Y08 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb1Q91Y08 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Gm23931-201ENSMUST00000103842 109 ntBASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Mir1938-201ENSMUST00000158746 100 ntBASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Gm18304-201ENSMUST00000189162 546 ntBASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb1Q91Y08 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Gm22018-201ENSMUST00000104357 131 ntBASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Gm13342-201ENSMUST00000121055 207 ntBASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb1Q91Y08 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms