Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trex1Q91XB0 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trex1Q91XB0 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trex1Q91XB0 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trex1Q91XB0 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trex1Q91XB0 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trex1Q91XB0 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trex1Q91XB0 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trex1Q91XB0 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trex1Q91XB0 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trex1Q91XB0 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trex1Q91XB0 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trex1Q91XB0 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trex1Q91XB0 Gm11450-201ENSMUST00000121144 333 ntBASIC14.29□□□□□ -0.12
Trex1Q91XB0 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trex1Q91XB0 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.29□□□□□ -0.12
Trex1Q91XB0 Mir1943-201ENSMUST00000158276 73 ntBASIC14.29□□□□□ -0.12
Trex1Q91XB0 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trex1Q91XB0 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC14.29□□□□□ -0.12
Trex1Q91XB0 Gm45118-201ENSMUST00000208928 825 ntBASIC14.29□□□□□ -0.12
Trex1Q91XB0 Gm14267-206ENSMUST00000226870 1209 ntBASIC14.29□□□□□ -0.12
Trex1Q91XB0 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trex1Q91XB0 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trex1Q91XB0 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trex1Q91XB0 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trex1Q91XB0 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trex1Q91XB0 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trex1Q91XB0 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trex1Q91XB0 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trex1Q91XB0 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.29□□□□□ -0.12
Trex1Q91XB0 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trex1Q91XB0 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trex1Q91XB0 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trex1Q91XB0 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trex1Q91XB0 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trex1Q91XB0 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trex1Q91XB0 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trex1Q91XB0 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trex1Q91XB0 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trex1Q91XB0 Gm22133-201ENSMUST00000102082 109 ntBASIC14.28□□□□□ -0.12
Trex1Q91XB0 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trex1Q91XB0 Gm13611-201ENSMUST00000118269 318 ntBASIC14.28□□□□□ -0.12
Trex1Q91XB0 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trex1Q91XB0 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trex1Q91XB0 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trex1Q91XB0 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trex1Q91XB0 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trex1Q91XB0 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trex1Q91XB0 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trex1Q91XB0 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trex1Q91XB0 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC14.28□□□□□ -0.12
Trex1Q91XB0 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trex1Q91XB0 Gm5369-201ENSMUST00000217499 588 ntBASIC14.28□□□□□ -0.12
Trex1Q91XB0 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.28□□□□□ -0.12
Trex1Q91XB0 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trex1Q91XB0 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trex1Q91XB0 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trex1Q91XB0 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trex1Q91XB0 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trex1Q91XB0 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trex1Q91XB0 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trex1Q91XB0 Gm26035-201ENSMUST00000083065 308 ntBASIC14.28□□□□□ -0.12
Trex1Q91XB0 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trex1Q91XB0 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trex1Q91XB0 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trex1Q91XB0 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trex1Q91XB0 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.28□□□□□ -0.12
Trex1Q91XB0 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.28□□□□□ -0.12
Trex1Q91XB0 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trex1Q91XB0 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trex1Q91XB0 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.27□□□□□ -0.12
Trex1Q91XB0 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trex1Q91XB0 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trex1Q91XB0 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.12
Trex1Q91XB0 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trex1Q91XB0 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trex1Q91XB0 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trex1Q91XB0 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.27□□□□□ -0.12
Trex1Q91XB0 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Trex1Q91XB0 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trex1Q91XB0 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trex1Q91XB0 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trex1Q91XB0 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trex1Q91XB0 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC14.27□□□□□ -0.12
Trex1Q91XB0 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trex1Q91XB0 Gm9062-201ENSMUST00000117712 727 ntBASIC14.27□□□□□ -0.13
Trex1Q91XB0 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.27□□□□□ -0.13
Trex1Q91XB0 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC14.27□□□□□ -0.13
Trex1Q91XB0 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
Trex1Q91XB0 Gm5732-201ENSMUST00000182596 1007 ntBASIC14.27□□□□□ -0.13
Trex1Q91XB0 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC14.27□□□□□ -0.13
Trex1Q91XB0 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC14.27□□□□□ -0.13
Trex1Q91XB0 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trex1Q91XB0 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trex1Q91XB0 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC14.27□□□□□ -0.13
Trex1Q91XB0 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trex1Q91XB0 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trex1Q91XB0 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trex1Q91XB0 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trex1Q91XB0 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms