Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm1Q8VC85 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Lsm1Q8VC85 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm1Q8VC85 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm1Q8VC85 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Lsm1Q8VC85 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm1Q8VC85 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm1Q8VC85 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm1Q8VC85 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm1Q8VC85 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Gm11964-201ENSMUST00000120982 444 ntBASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Gm7561-201ENSMUST00000211203 886 ntBASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Gm8227-201ENSMUST00000223306 571 ntBASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm1Q8VC85 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm1Q8VC85 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lsm1Q8VC85 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lsm1Q8VC85 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lsm1Q8VC85 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm1Q8VC85 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm1Q8VC85 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm1Q8VC85 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm1Q8VC85 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm1Q8VC85 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12□□□□□ -0.49
Lsm1Q8VC85 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12□□□□□ -0.49
Lsm1Q8VC85 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12□□□□□ -0.49
Lsm1Q8VC85 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Lsm1Q8VC85 Gm8038-201ENSMUST00000164674 2044 ntBASIC12□□□□□ -0.49
Lsm1Q8VC85 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm1Q8VC85 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm1Q8VC85 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm1Q8VC85 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm1Q8VC85 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lsm1Q8VC85 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lsm1Q8VC85 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12□□□□□ -0.49
Lsm1Q8VC85 Rmrp-201ENSMUST00000157463 271 ntBASIC12□□□□□ -0.49
Lsm1Q8VC85 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lsm1Q8VC85 Gm27847-201ENSMUST00000183711 107 ntBASIC12□□□□□ -0.49
Lsm1Q8VC85 Gm27375-201ENSMUST00000183799 107 ntBASIC12□□□□□ -0.49
Lsm1Q8VC85 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12□□□□□ -0.49
Lsm1Q8VC85 Gm9794-201ENSMUST00000202370 423 ntBASIC12□□□□□ -0.49
Lsm1Q8VC85 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Lsm1Q8VC85 AC069562.3-201ENSMUST00000225387 587 ntBASIC12□□□□□ -0.49
Lsm1Q8VC85 AL732506.1-201ENSMUST00000226420 281 ntBASIC12□□□□□ -0.49
Lsm1Q8VC85 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm1Q8VC85 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12□□□□□ -0.49
Lsm1Q8VC85 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Lsm1Q8VC85 Gm6091-201ENSMUST00000098307 165 ntBASIC12□□□□□ -0.49
Lsm1Q8VC85 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm1Q8VC85 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Lsm1Q8VC85 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm1Q8VC85 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm1Q8VC85 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12□□□□□ -0.49
Lsm1Q8VC85 Gm1995-201ENSMUST00000220838 2602 ntBASIC12□□□□□ -0.49
Lsm1Q8VC85 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm1Q8VC85 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm1Q8VC85 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm1Q8VC85 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms