Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Gm12384-201ENSMUST00000119228 919 ntBASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Gm12341-201ENSMUST00000119724 503 ntBASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Gm18473-201ENSMUST00000220543 868 ntBASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Nup35Q8R4R6 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Syt7-204ENSMUST00000223586 1344 ntBASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Gm42706-201ENSMUST00000199733 1910 ntBASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Gm12151-201ENSMUST00000121374 290 ntBASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Gm15429-201ENSMUST00000151268 798 ntBASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Gm8099-201ENSMUST00000200510 742 ntBASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Nup35Q8R4R6 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms