Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdt1Q8R4E9 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdt1Q8R4E9 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Cdt1Q8R4E9 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdt1Q8R4E9 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Gm3890-201ENSMUST00000182416 207 ntBASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Morn2-202ENSMUST00000227729 656 ntBASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdt1Q8R4E9 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Gm14017-201ENSMUST00000121934 386 ntBASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Gm37986-201ENSMUST00000193285 383 ntBASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdt1Q8R4E9 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cdt1Q8R4E9 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cdt1Q8R4E9 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.15□□□□□ -0.47
Cdt1Q8R4E9 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Cdt1Q8R4E9 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.47
Cdt1Q8R4E9 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cdt1Q8R4E9 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms