Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Daam2-202ENSMUST00000224595 1926 ntBASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Gm23363-201ENSMUST00000175024 79 ntBASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Zcchc9Q8R1J3 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Zcchc9Q8R1J3 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Zcchc9Q8R1J3 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Zcchc9Q8R1J3 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Zcchc9Q8R1J3 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Zcchc9Q8R1J3 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Zcchc9Q8R1J3 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Zcchc9Q8R1J3 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Zcchc9Q8R1J3 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.52□□□□□ -0.4
Zcchc9Q8R1J3 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Zcchc9Q8R1J3 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 Mir6927-201ENSMUST00000184494 71 ntBASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 Gm3096-201ENSMUST00000185770 364 ntBASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Zcchc9Q8R1J3 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms