Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 Gm24136-201ENSMUST00000083374 165 ntBASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cchcr1Q8K2I2 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cchcr1Q8K2I2 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cchcr1Q8K2I2 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cchcr1Q8K2I2 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Cchcr1Q8K2I2 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cchcr1Q8K2I2 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cchcr1Q8K2I2 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.78□□□□□ -0.04
Cchcr1Q8K2I2 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cchcr1Q8K2I2 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.78□□□□□ -0.04
Cchcr1Q8K2I2 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cchcr1Q8K2I2 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cchcr1Q8K2I2 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cchcr1Q8K2I2 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cchcr1Q8K2I2 CT025624.1-201ENSMUST00000224007 2700 ntBASIC14.78□□□□□ -0.04
Cchcr1Q8K2I2 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC14.78□□□□□ -0.04
Cchcr1Q8K2I2 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.78□□□□□ -0.04
Cchcr1Q8K2I2 Gm27682-201ENSMUST00000183930 110 ntBASIC14.78□□□□□ -0.04
Cchcr1Q8K2I2 Gm29127-201ENSMUST00000188304 517 ntBASIC14.78□□□□□ -0.04
Cchcr1Q8K2I2 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.78□□□□□ -0.04
Cchcr1Q8K2I2 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.78□□□□□ -0.04
Cchcr1Q8K2I2 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cchcr1Q8K2I2 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cchcr1Q8K2I2 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cchcr1Q8K2I2 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cchcr1Q8K2I2 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cchcr1Q8K2I2 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cchcr1Q8K2I2 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cchcr1Q8K2I2 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Cchcr1Q8K2I2 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cchcr1Q8K2I2 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.78□□□□□ -0.04
Cchcr1Q8K2I2 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cchcr1Q8K2I2 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.78□□□□□ -0.04
Cchcr1Q8K2I2 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cchcr1Q8K2I2 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cchcr1Q8K2I2 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.77□□□□□ -0.04
Cchcr1Q8K2I2 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cchcr1Q8K2I2 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cchcr1Q8K2I2 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cchcr1Q8K2I2 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cchcr1Q8K2I2 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
Cchcr1Q8K2I2 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cchcr1Q8K2I2 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC14.77□□□□□ -0.04
Cchcr1Q8K2I2 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cchcr1Q8K2I2 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cchcr1Q8K2I2 Gm16177-201ENSMUST00000120728 718 ntBASIC14.77□□□□□ -0.05
Cchcr1Q8K2I2 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cchcr1Q8K2I2 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cchcr1Q8K2I2 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.77□□□□□ -0.05
Cchcr1Q8K2I2 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cchcr1Q8K2I2 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cchcr1Q8K2I2 Gm43818-201ENSMUST00000200605 466 ntBASIC14.77□□□□□ -0.05
Cchcr1Q8K2I2 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.77□□□□□ -0.05
Cchcr1Q8K2I2 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Cchcr1Q8K2I2 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.77□□□□□ -0.05
Cchcr1Q8K2I2 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.77□□□□□ -0.05
Cchcr1Q8K2I2 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cchcr1Q8K2I2 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cchcr1Q8K2I2 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cchcr1Q8K2I2 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cchcr1Q8K2I2 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.77□□□□□ -0.05
Cchcr1Q8K2I2 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cchcr1Q8K2I2 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cchcr1Q8K2I2 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Cchcr1Q8K2I2 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cchcr1Q8K2I2 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cchcr1Q8K2I2 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cchcr1Q8K2I2 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC14.77□□□□□ -0.05
Cchcr1Q8K2I2 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.77□□□□□ -0.05
Cchcr1Q8K2I2 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cchcr1Q8K2I2 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cchcr1Q8K2I2 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cchcr1Q8K2I2 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Cchcr1Q8K2I2 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cchcr1Q8K2I2 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cchcr1Q8K2I2 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cchcr1Q8K2I2 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cchcr1Q8K2I2 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC14.76□□□□□ -0.05
Cchcr1Q8K2I2 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.76□□□□□ -0.05
Cchcr1Q8K2I2 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cchcr1Q8K2I2 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cchcr1Q8K2I2 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cchcr1Q8K2I2 Gm1335-201ENSMUST00000121653 386 ntBASIC14.76□□□□□ -0.05
Cchcr1Q8K2I2 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms