Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ccdc60Q8C4J0 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Ccdc60Q8C4J0 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc60Q8C4J0 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc60Q8C4J0 AC125108.1-201ENSMUST00000218986 2330 ntBASIC15.95■□□□□ 0.14
Ccdc60Q8C4J0 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc60Q8C4J0 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc60Q8C4J0 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
Ccdc60Q8C4J0 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc60Q8C4J0 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc60Q8C4J0 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
Ccdc60Q8C4J0 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc60Q8C4J0 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc60Q8C4J0 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc60Q8C4J0 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc60Q8C4J0 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC15.95■□□□□ 0.14
Ccdc60Q8C4J0 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC15.95■□□□□ 0.14
Ccdc60Q8C4J0 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc60Q8C4J0 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC15.95■□□□□ 0.14
Ccdc60Q8C4J0 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc60Q8C4J0 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc60Q8C4J0 Gm17383-201ENSMUST00000078739 1041 ntBASIC15.95■□□□□ 0.14
Ccdc60Q8C4J0 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Ccdc60Q8C4J0 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc60Q8C4J0 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC15.95■□□□□ 0.14
Ccdc60Q8C4J0 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc60Q8C4J0 Gm5884-201ENSMUST00000036712 1479 ntBASIC15.95■□□□□ 0.14
Ccdc60Q8C4J0 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc60Q8C4J0 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc60Q8C4J0 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc60Q8C4J0 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ccdc60Q8C4J0 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC15.94■□□□□ 0.14
Ccdc60Q8C4J0 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc60Q8C4J0 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc60Q8C4J0 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Ccdc60Q8C4J0 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc60Q8C4J0 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc60Q8C4J0 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc60Q8C4J0 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc60Q8C4J0 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc60Q8C4J0 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc60Q8C4J0 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc60Q8C4J0 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc60Q8C4J0 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Ccdc60Q8C4J0 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
Ccdc60Q8C4J0 Gm27023-201ENSMUST00000182372 285 ntBASIC15.94■□□□□ 0.14
Ccdc60Q8C4J0 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC15.94■□□□□ 0.14
Ccdc60Q8C4J0 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc60Q8C4J0 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc60Q8C4J0 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc60Q8C4J0 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc60Q8C4J0 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc60Q8C4J0 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc60Q8C4J0 Adra1a-206ENSMUST00000225182 2337 ntBASIC15.94■□□□□ 0.14
Ccdc60Q8C4J0 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc60Q8C4J0 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Ccdc60Q8C4J0 Gm2673-201ENSMUST00000120958 1608 ntBASIC15.94■□□□□ 0.14
Ccdc60Q8C4J0 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
Ccdc60Q8C4J0 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC15.94■□□□□ 0.14
Ccdc60Q8C4J0 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Ccdc60Q8C4J0 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccdc60Q8C4J0 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccdc60Q8C4J0 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Ccdc60Q8C4J0 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccdc60Q8C4J0 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccdc60Q8C4J0 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccdc60Q8C4J0 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccdc60Q8C4J0 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
Ccdc60Q8C4J0 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccdc60Q8C4J0 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Ccdc60Q8C4J0 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC15.93■□□□□ 0.14
Ccdc60Q8C4J0 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Ccdc60Q8C4J0 Gm45865-201ENSMUST00000211815 945 ntBASIC15.93■□□□□ 0.14
Ccdc60Q8C4J0 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccdc60Q8C4J0 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Ccdc60Q8C4J0 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Ccdc60Q8C4J0 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC15.93■□□□□ 0.14
Ccdc60Q8C4J0 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ccdc60Q8C4J0 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccdc60Q8C4J0 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ccdc60Q8C4J0 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccdc60Q8C4J0 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccdc60Q8C4J0 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ccdc60Q8C4J0 Gm4735-201ENSMUST00000138679 1302 ntBASIC15.93■□□□□ 0.14
Ccdc60Q8C4J0 Gm5855-201ENSMUST00000200240 1305 ntBASIC15.93■□□□□ 0.14
Ccdc60Q8C4J0 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc60Q8C4J0 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc60Q8C4J0 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc60Q8C4J0 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc60Q8C4J0 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc60Q8C4J0 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc60Q8C4J0 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Ccdc60Q8C4J0 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc60Q8C4J0 Gm45342-201ENSMUST00000210903 1363 ntBASIC15.92■□□□□ 0.14
Ccdc60Q8C4J0 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ccdc60Q8C4J0 Gm13570-201ENSMUST00000140763 309 ntBASIC15.92■□□□□ 0.14
Ccdc60Q8C4J0 Gm8494-201ENSMUST00000178171 1233 ntBASIC15.92■□□□□ 0.14
Ccdc60Q8C4J0 Gm7895-201ENSMUST00000187459 1173 ntBASIC15.92■□□□□ 0.14
Ccdc60Q8C4J0 Gm42937-201ENSMUST00000197360 752 ntBASIC15.92■□□□□ 0.14
Ccdc60Q8C4J0 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms