Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Gm6244-201ENSMUST00000178732 841 ntBASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Gm2495-201ENSMUST00000191160 466 ntBASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Mir339-201ENSMUST00000083659 96 ntBASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Mir1894-201ENSMUST00000122802 81 ntBASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Gm27839-201ENSMUST00000184242 106 ntBASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Vps9d1Q8C190 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps9d1Q8C190 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vps9d1Q8C190 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps9d1Q8C190 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps9d1Q8C190 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps9d1Q8C190 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps9d1Q8C190 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps9d1Q8C190 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vps9d1Q8C190 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps9d1Q8C190 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.71□□□□□ -0.53
Vps9d1Q8C190 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.71□□□□□ -0.53
Vps9d1Q8C190 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.71□□□□□ -0.53
Vps9d1Q8C190 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.71□□□□□ -0.53
Vps9d1Q8C190 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vps9d1Q8C190 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.71□□□□□ -0.53
Vps9d1Q8C190 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps9d1Q8C190 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Vps9d1Q8C190 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.71□□□□□ -0.53
Vps9d1Q8C190 Gm11425-201ENSMUST00000119608 498 ntBASIC11.71□□□□□ -0.53
Vps9d1Q8C190 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps9d1Q8C190 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.71□□□□□ -0.53
Vps9d1Q8C190 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps9d1Q8C190 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Vps9d1Q8C190 Gm9630-201ENSMUST00000178304 885 ntBASIC11.71□□□□□ -0.53
Vps9d1Q8C190 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Vps9d1Q8C190 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms