Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ube3dQ8BX13 Gm11637-201ENSMUST00000120601 592 ntBASIC11.17□□□□□ -0.62
Ube3dQ8BX13 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.17□□□□□ -0.62
Ube3dQ8BX13 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.17□□□□□ -0.62
Ube3dQ8BX13 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.17□□□□□ -0.62
Ube3dQ8BX13 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ube3dQ8BX13 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.17□□□□□ -0.62
Ube3dQ8BX13 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.17□□□□□ -0.62
Ube3dQ8BX13 Gm43179-201ENSMUST00000198797 275 ntBASIC11.17□□□□□ -0.62
Ube3dQ8BX13 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ube3dQ8BX13 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ube3dQ8BX13 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Ube3dQ8BX13 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ube3dQ8BX13 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ube3dQ8BX13 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Ube3dQ8BX13 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ube3dQ8BX13 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Ube3dQ8BX13 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.17□□□□□ -0.62
Ube3dQ8BX13 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ube3dQ8BX13 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.17□□□□□ -0.62
Ube3dQ8BX13 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ube3dQ8BX13 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ube3dQ8BX13 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ube3dQ8BX13 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ube3dQ8BX13 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ube3dQ8BX13 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
Ube3dQ8BX13 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ube3dQ8BX13 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ube3dQ8BX13 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ube3dQ8BX13 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ube3dQ8BX13 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ube3dQ8BX13 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.17□□□□□ -0.62
Ube3dQ8BX13 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.17□□□□□ -0.62
Ube3dQ8BX13 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Ube3dQ8BX13 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ube3dQ8BX13 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Gm25261-201ENSMUST00000157416 134 ntBASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Gm16379-201ENSMUST00000161469 348 ntBASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Gm8762-201ENSMUST00000193486 339 ntBASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ube3dQ8BX13 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ube3dQ8BX13 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ube3dQ8BX13 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ube3dQ8BX13 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ube3dQ8BX13 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ube3dQ8BX13 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.15□□□□□ -0.62
Ube3dQ8BX13 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ube3dQ8BX13 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.15□□□□□ -0.62
Ube3dQ8BX13 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ube3dQ8BX13 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ube3dQ8BX13 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Ube3dQ8BX13 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ube3dQ8BX13 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ube3dQ8BX13 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Ube3dQ8BX13 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ube3dQ8BX13 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ube3dQ8BX13 Mir1247-201ENSMUST00000116706 82 ntBASIC11.15□□□□□ -0.62
Ube3dQ8BX13 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.15□□□□□ -0.62
Ube3dQ8BX13 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ube3dQ8BX13 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.15□□□□□ -0.62
Ube3dQ8BX13 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ube3dQ8BX13 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Ube3dQ8BX13 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms