Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Gm7336-201ENSMUST00000107041 1232 ntBASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Gm4875-201ENSMUST00000118257 786 ntBASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Gm6447-201ENSMUST00000118905 835 ntBASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Gm38294-201ENSMUST00000192831 381 ntBASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 AC096628.2-201ENSMUST00000225443 1413 ntBASIC10.3□□□□□ -0.76
Smco3Q8BQM7 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Gm11594-201ENSMUST00000122313 162 ntBASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Gm24513-201ENSMUST00000174964 138 ntBASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Smco3Q8BQM7 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Smco3Q8BQM7 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms